RetrogeneDB ID: | retro_ttru_1091 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_102487:79263..79850(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM126A | ||
Ensembl ID: | ENSTTRG00000012008 | ||
Aliases: | None | ||
Description: | transmembrane protein 126A [Source:HGNC Symbol;Acc:25382] |
Percent Identity: | 90.36 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MENHKPDGTVKKNLIEII-TRKINQLPEAERNLLENGSTYIGLNAALCGLIANSLFRRILHVTQAPVAAG |
MEN..PDGTVKKN.IEII..RKI.QLP.AERNLLENGSTYIGLNAALCGLIANSLFR.ILHVTQA.VAAG | |
Retrocopy | MENPNPDGTVKKNVIEII<SRKISQLPKAERNLLENGSTYIGLNAALCGLIANSLFRCILHVTQARVAAG |
Parental | LPMAVIPFLMAHVSFKGFVSLPLNTGDLHCETCTITRGGLVGLVFGGLYPVFLAIPVNGGLAARYNSALL |
LPMAVIPFL..HVS.KG.VSLPL.TGDLHCETCTITRGGLVGLVFGGLYPVFLAIPVNG.LAARY.SALL | |
Retrocopy | LPMAVIPFLTVHVSYKGLVSLPLTTGDLHCETCTITRGGLVGLVFGGLYPVFLAIPVNGDLAARYSSALL |
Parental | PEKGNILNYWIRISKPVFRKMLFPILLQTVFAAYLGSRQYKLLIKALQLPEPDLEIQ |
P.KGNILNYWIRISKPVFRKM.FPILLQT.FAAYLGSRQYKLLIKALQLPEPDLEIQ | |
Retrocopy | PKKGNILNYWIRISKPVFRKM*FPILLQTGFAAYLGSRQYKLLIKALQLPEPDLEIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |