RetrogeneDB ID: | retro_ttru_125 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_130:159558..159904(-) | ||
Located in intron of: | ENSTTRG00000006005 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1G1 | ||
Ensembl ID: | ENSTTRG00000015203 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864] |
Percent Identity: | 77.31 % |
Parental protein coverage: | 98.32 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MASQSQGIQQLLQAEKRAAEKVSEARKR-KNRRLKQAKEE-AQAEIEQYRLQREKEFKAKEAAALGSHGS |
.AS.SQG.QQLLQAEKRAA..V.E..K..KNRRLKQAK...AQA..EQYRLQREKEFKA..AAALGSHGS | |
Retrocopy | VASRSQGTQQLLQAEKRAAKEVAEDHKK<KNRRLKQAKQQ<AQAGSEQYRLQREKEFKAEGAAALGSHGS |
Parental | CSTEVEKDTQEKMTILQTYFRQNRDEVLDNLLAFVCDIRPEIHENYRIN |
CSTEVE.D.QEKMTILQTYFRQNR.E.LDNLLA..CDI.PEIH.NY..N | |
Retrocopy | CSTEVE-DPQEKMTILQTYFRQNRGELLDNLLALDCDIQPEIHKNYHKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000020461 | 3 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000008083 | 15 retrocopies | |
Dipodomys ordii | ENSDORG00000014850 | 5 retrocopies | |
Equus caballus | ENSECAG00000011155 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008080 | 3 retrocopies | |
Loxodonta africana | ENSLAFG00000013437 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000015368 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000008657 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000004899 | 4 retrocopies | |
Monodelphis domestica | ENSMODG00000019574 | 1 retrocopy | |
Mus musculus | ENSMUSG00000039105 | 5 retrocopies | |
Otolemur garnettii | ENSOGAG00000010103 | 3 retrocopies | |
Pteropus vampyrus | ENSPVAG00000008334 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000008163 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000015203 | 2 retrocopies |
retro_ttru_125 , retro_ttru_480,
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