RetrogeneDB ID: | retro_etel_996 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_198630:11622..11968(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1G1 | ||
Ensembl ID: | ENSETEG00000008080 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864] |
Percent Identity: | 52.07 % |
Parental protein coverage: | 99.15 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | ASQSQGIQQLLQAEKRAAEKVSEARKRKNRRLKQAKEEAQAEIEQYRLQR-EKEFKAKEAAALGSHG-SV |
A..SQ.IQ.LL..EK.AA.KVSEA.K.K..RL.QAK.EA.A..E.Y.L.R..K..KA.EA..LGS.G... | |
Retrocopy | AGESQAIQNLLHTEKQAAGKVSEALKQKTQRLRQAK-EARAHLEEYHLER<RKLSKA*EAVTLGSPG>TA |
Parental | STEVEKETEEKMTLLQ-TYF-RQNRDDVLDSLLKFICDIHPEIHENYRFNG |
.....KET..KM.....TYF..QN..DVLD....F.CDI..EIH.N...NG | |
Retrocopy | AKREKKETQGKMPVPR<TYF<LQNSHDVLDTFPSFVCDICSEIHANDHRNG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |