RetrogeneDB ID: | retro_etel_594 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_100562:2014..2276(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP6V1G1 | ||
Ensembl ID: | ENSETEG00000008080 | ||
Aliases: | None | ||
Description: | ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 [Source:HGNC Symbol;Acc:864] |
Percent Identity: | 82.22 % |
Parental protein coverage: | 72.03 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MASQSQGIQQLLQAEKRAA-EKVSEARKRKN-RRLKQAKEEAQAEIEQYRLQREKEFK-AKEA-AALGSH |
MA.QSQGIQQLLQAEKRAA.EKV.EARKRK..RRLKQAKEEAQAEIEQYRLQREKEFK.AKEA.AALGSH | |
Retrocopy | MACQSQGIQQLLQAEKRAA>EKVAEARKRKA>RRLKQAKEEAQAEIEQYRLQREKEFK>AKEA>AALGSH |
Parental | GSV-STEVEKETEEKMTLLQ |
GS....E.E.ET.EKMT.L. | |
Retrocopy | GSLQAPEMERETREKMTVLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |