Parental gene: | GRMZM2G105644 |
| Aliases: | None |
| Description: | None |
| Organism: | Maize (Zea mays) |
| Coordinates: | 5:206940310..206942851(+) |
>GRMZM2G105644
ATGACTTCCCTCTCCTCCGCGGTGGCACTGCCGTCCTCGTGCCGGGCCCGGCCGGCGGGGGGCAGCCGGAGGGCGCGGAT
GGTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTGCCGAACGGGCGGCGGCTGCGGGTGGCTGTGGTGGGAGGCGGCC
CCGCCGGTGGCGCCGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTAATCGAGCGGAAGATGGACAACTGC
AAGCCCTGCGGCGGCGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTCGACCTTGTGGACCGCAAGGTGAG
GAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCCGCACGCTCGCGCCCCACGAGTACATCGGGATGG
TCAGGCGCGAGGTGCTCGACGCCTACCTCCGCTCACGGGCACAGTCCGTCGGCGCGGAGGTCGTCAACGGCCTCTTCCTA
AGGTACGAGGCGCCCAAAGAGCCGAACGGCTCGTACGTGGTGCACTACAACCACTACGACGGCAGCAACGGCAAGGTCGG
CGGCGAGAAGCGGTCGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCTCGCGTGGCCAAGGACATGGGCG
CGGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGGTGTACTACGAGGAGCGC
GCGGAGATGTACGTCGGCGACGACGTCTCTCCCGACTTCTACGGCTGGGTGTTCCCCAAGTGCGACCACGTCGCCGTCGG
CACCGGCACCGTCACGCACAAGGCCGACATCAAGAAGTTTCAGGCCGCCACGCGCCTCCGCGCCAAGGACAAGATTGAGG
GCGGCAAGATCATCCGCGTCGAGGCGCACCCCATCCCCGAGCACCCCAGGCCTAAGAGGGTGTCCGGGCGGGTGACGCTG
GTGGGCGACGCCGCGGGGTACGTGACCAAGTGCTCCGGCGAGGGCATCTACTTCGCGGCGAAGAGCGGGCGGATGTGCGC
CGAGGCCATCGTGGCGGGCTCCGCCAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAAGTACCTGGCCGAGTTCG
ACCGCCTCTACTGGCCCACTTACAAGGTGCTGGACATCCTGCAGAAGGTGTTCTACCGCTCCAACGCGGCGCGCGAGGCC
TTCGTGGAGATGTGCGCCGACGACTACGTGCAGAAGATGACCTTCGACAGCTACCTCTACAAGCGCGTCGTGCCGGGCAA
CCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCAGGGCCACCGCACTGCGCCGGGAGATGGAGA
AGGTCACCTTGTGA
ATGACTTCCCTCTCCTCCGCGGTGGCACTGCCGTCCTCGTGCCGGGCCCGGCCGGCGGGGGGCAGCCGGAGGGCGCGGAT
GGTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTGCCGAACGGGCGGCGGCTGCGGGTGGCTGTGGTGGGAGGCGGCC
CCGCCGGTGGCGCCGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTAATCGAGCGGAAGATGGACAACTGC
AAGCCCTGCGGCGGCGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTCGACCTTGTGGACCGCAAGGTGAG
GAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCCGCACGCTCGCGCCCCACGAGTACATCGGGATGG
TCAGGCGCGAGGTGCTCGACGCCTACCTCCGCTCACGGGCACAGTCCGTCGGCGCGGAGGTCGTCAACGGCCTCTTCCTA
AGGTACGAGGCGCCCAAAGAGCCGAACGGCTCGTACGTGGTGCACTACAACCACTACGACGGCAGCAACGGCAAGGTCGG
CGGCGAGAAGCGGTCGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCTCGCGTGGCCAAGGACATGGGCG
CGGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGGTGTACTACGAGGAGCGC
GCGGAGATGTACGTCGGCGACGACGTCTCTCCCGACTTCTACGGCTGGGTGTTCCCCAAGTGCGACCACGTCGCCGTCGG
CACCGGCACCGTCACGCACAAGGCCGACATCAAGAAGTTTCAGGCCGCCACGCGCCTCCGCGCCAAGGACAAGATTGAGG
GCGGCAAGATCATCCGCGTCGAGGCGCACCCCATCCCCGAGCACCCCAGGCCTAAGAGGGTGTCCGGGCGGGTGACGCTG
GTGGGCGACGCCGCGGGGTACGTGACCAAGTGCTCCGGCGAGGGCATCTACTTCGCGGCGAAGAGCGGGCGGATGTGCGC
CGAGGCCATCGTGGCGGGCTCCGCCAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAAGTACCTGGCCGAGTTCG
ACCGCCTCTACTGGCCCACTTACAAGGTGCTGGACATCCTGCAGAAGGTGTTCTACCGCTCCAACGCGGCGCGCGAGGCC
TTCGTGGAGATGTGCGCCGACGACTACGTGCAGAAGATGACCTTCGACAGCTACCTCTACAAGCGCGTCGTGCCGGGCAA
CCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCAGGGCCACCGCACTGCGCCGGGAGATGGAGA
AGGTCACCTTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G59430 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI02G30980 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA06G04710 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G29860 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G34000 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0744900 | ortholog_one2one | 1 retrogene | |
| Sorghum bicolor | Sb04g028050 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6DL_0FF72D765 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_zmay_29 | 57.77 | 94.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all GRMZM2G105644 retrocopies