Parental gene:

BGIOSGA028079

Aliases:None
Description:None
Organism:Rice subsp. indica (Oryza sativa indica)
Coordinates:8:4632840..4638820(+)


>BGIOSGA028079
ATGGCTCGCCGTCGTCGAGGTTTTCCGGCGACGTTGTTGGTCACGCTGCTGCGGCTCGTCGGCTGCCTGCTTCTCGTCTG
CCTCGCCGCGCCGCCGTGCGCGGCGCAGCAGGTCAAGACGTCGCACGCGCAGTTCGCGTTCCACCTCCCGCTCCCCGATG
GCGTCACCGGCGCCGAGAGCCTCGCCTTCGACTCCTCCAACCATGGCCCCTACACCGGCGTCTCCCACGGCCGCGTCCTC
CGCTGGGGCGGCGCCGCCGCCGGCTGGACCACCTTCGCGCACCACCAAGACTACCGGAAGATCCCGATGTGCACGACGCC
GGTGGCGCCGCCGGAGGAGACGGAGAGCATGTGCAGGCGGCCGCTCGGGCTCGCGTTCCACGACAGGACGGGCGACCTCT
ACATCGCCGACGCTTTACATATGCGTGTCGGGCCGCGCGGCGGCGAGGCTGAGGTGCTTGCCGCCGGCGAGGACGGCGTC
CCGTTCAACTTCGTCAATGGCATCGACGTCGACCAGGCCACCGGTGATGTCTACTTCACCGATAGTAGCACCACCTACCC
ACGCCGGTTTAACAGCGAGATCATGATGAATGCCGATGCGACATCGCGGCTGCTGAAGTACGACGCGGCGACGAAGCAGG
TGACCGTGCTCAGGTCCGGGCTTCCGTACGCCAATGGCGTGGCCGTCAGCCGCGACGGGAGCCACGCCGTGGTGGCGCAC
ACGGTGCCGTGCCAGGCGTTCCGGTACTGGATCAAGGGGCCCAACGCCGGCGAGTACGAGCTCCTCGCCGACCTGCCGGG
TTACCCCGACAACGTCCGGCGAGACGCCAGGGGGGGATACTGGGTGGCGCTCAACCAGGAGAAGGTGCGGCTCGACGCGA
CGGCGGCGGCGGCGGTGGCTCCTCCGGCGAAGCACCTCGTCGGCGTCCGGCTCGACGGCGATGGCGTCGAGGTCGAGGAG
CTGACGACTGCCAAGGGTGTGACGCTCAGTGAGGTTGTGGAGAGGGGCGGGAAATTGTGGCTCGGCTCTGTTGAACTCGA
TTTCATTGGCCTAATAATGCAATGA

Species Parental gene accession Homology type Retrogenes number
Oryza glumaepatula OGLUM08G04830 ortholog_one2one 1 retrogene
retro_oglu_15,
Oryza meridionalis OMERI08G04560 ortholog_one2one 1 retrogene
retro_omer_14,
Oryza punctata OPUNC08G04420 ortholog_one2one 1 retrogene
retro_opun_39,
Oryza glaberrima ORGLA08G0040000 ortholog_one2one 1 retrogene
retro_ogla_41,
Oryza rufipogon ORUFI08G05030 ortholog_one2one 1 retrogene
retro_oruf_9,
Oryza sativa japonica OS08G0175000 ortholog_one2one 1 retrogene
retro_osat_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oind_6 67.69 82.49
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Download FASTA sequences of all BGIOSGA028079 retrocopies