Parental gene:

OPUNC08G04420

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:8:3888326..3890751(+)


>OPUNC08G04420
ATGGCTCGCCGTCGTCGAGGTTTTCCGGCGTCGACGTTGCTTTTGCTGCTCGTCAGCTGCCTGCTTGTCTTCCTCGGCGC
CGCGCAGCAGCTGCAGGTCAAGACGTCGCACGCGCAGTTCGCCTTCCACCTCCCGCTCCCCGACGGCGTCACCGGCGCCG
AGAGCCTCGCCTTCGACACCGCCAACCATGGCCCCTACACTGGCGTCTCCGACGGCCGCGTCCTCCGCTGGGGCGGCGCC
GCCGCCGGGTGGACCACCTTCGCGCACCACCAAGACTACCGGAAGATCCCGATGTGCACGACGCCGGTGGCGCCGCCGGA
GGAGACGGAGAGCATGTGCGGGCGCCCGCTCGGGCTCGCGTTCCACAACGAGACGGGCGACCTCTACATCGCCGACGCGT
ACAAGGGGCTGATGCGTGTCGGGCCGGGCGGCGGCGAGGCGGAGGTGCTCGCCGCCGGCGCGGACGGCGTCCCGTTCAAC
TTCGTCAACGGCATCGACGTCGATCAGGCCACCGGTGATGTCTACTTCACCGATAGTAGCACCACGTACCCACGCCGATT
TAACAGCGAGATCATGATGAACGCCGACGCGACGGCGCGGCTGCTGAAGTACGACGCGGCGACGAAGCAGGTGGCCGTGC
TCAGGGCCGGGCTGCCGTACGCCAACGGCGTGGCGGTCAGCCACGGCGGGGAGCACGTCGTGGTGGCGCACACGGTGCCG
TGCCAGGCGTTCAGGTACTGGATCAAGGGGGCCAAGGCCGGCGAGTACGAGCTCTTCGCCGATCTCCCGGGGTACCCTGA
CAATGTCCGGCGAGACGCCAAGGGGGGATACTGGGTGGCGCTCAACCAGGAGAAGGTGCGGCTCGACGCGGCGGCCGCCG
TGGTTCCTCCGGCCAAGCACCTCGTCGGCGTCCGGCTCAACGGCGATGGCGTCGAGGTCGAGGAGCTAACGGCCGCCAAG
GGTGTGACGCTCAGCGAGGTTGTGGAGAAGGGTGGCAAGTTGTGGCTCGGCTCTGTCGAACTGGACTTCATTGGCCTAAT
GCAATAA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA028079 ortholog_one2one 1 retrogene
retro_oind_6,
Oryza glumaepatula OGLUM08G04830 ortholog_one2one 1 retrogene
retro_oglu_15,
Oryza meridionalis OMERI08G04560 ortholog_one2one 1 retrogene
retro_omer_14,
Oryza glaberrima ORGLA08G0040000 ortholog_one2one 1 retrogene
retro_ogla_41,
Oryza rufipogon ORUFI08G05030 ortholog_one2one 1 retrogene
retro_oruf_9,
Oryza sativa japonica OS08G0175000 ortholog_one2one 1 retrogene
retro_osat_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_39 70.97 97.99
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Download FASTA sequences of all OPUNC08G04420 retrocopies