Parental gene: | BRADI2G61140 |
| Aliases: | None |
| Description: | None |
| Organism: | Purple false brome (Brachypodium distachyon) |
| Coordinates: | 2:58277541..58281469(-) |
>BRADI2G61140
ATGGCGGCTCCCCCTCGCGGCCCCCGGCGCCGGCCGCGACCCCATACCCTCCCCGCCGCCGCCATCCTCGTCCTAAGCCT
CCTCCTCCTCTCACCACCATCCTCCTCCTCCTCGGCGGCGGCGGGGCCGACGAGCCCGATCAAGACGGTGGTGGTGGTGG
TAATGGAGAACCGCTCCTTCGACCACATGCTGGGGTGGATGAAATCCCTGAACCCGGCCATCGACGGCGTCACGGGGGCC
GAATGGAACCCGGCGAACGCCTCCGACCCGTCCTCCCCGCGGGTCTACTTCCGCGACGGCGCGCAGTACGTGGACCCGGA
CCCGGGCCACTCGTACCAGGAGATCCGCCAGCAGGTGTTCGGCTCCGACGACGCCTCCGGCCCCGCCAAGATGAACGGGT
TCGTGCAGCAGGCCACCTCCATCGGTGGCGGCAACATGACCGACGCCGTCATGCACGGCTACAAGCCCGACGCCGTCGCC
GTCTACAAGGAGCTCGTGTCCCAGTTCGCCGTCTGCGACCGATGGTTCGCGTCCGTCCCCTCGTCGACCCAGCCTAACCG
CCTCTTCGTCCACTCCGGTACCTCCGGCGGCGCCACCAGCAACAACCCAGAGTTGCTTGCCGAGGGTTACCCGCAGAGGA
CGATCTTCGACAACATCTACGACGCTGGCCTCTCCTTCGGCGTCTACTTCCAGGACGTGCCGGCGGTGCTCTTCTACCGC
AACCTCCGCAAGATCAAGTACCTCCTCAAGTTCCACCCGTTCCACAACACGTTCCGCGACCACGCCCAGAGCGGCAACCT
GCCAAACTACGCCGTCGTGGAGCAGCATTACATGGACTCCAAGAGCCACCCGGCCAACGACGACCACCCTTCCCACGACG
TCTACCAGGGCCAGATGTTCATCAAGGAGATCTACGAGACCCTGCGTGCCAGCCCCCAGTGGAACGAGACGCTCATGGTC
ATCACCTACGACGAGCATGGCGGGTTCTTCGACCATGTGCCGACTCCTGTCGATAACGTGCCCAGCCCTGACGGCATTGT
TGGTCCTCCGCCTTATAACTTCGAGTTCAACAGGTTGGGGGTGCGCGTCCCGACCATCTTCATCTCCCCGTGGATCGAGA
AGGGAACTGTTGTCCATGGGCCAAATGGAAGTCCAACCCCGAATTCACAGTACGAGCACTCGTCCATCCCTGCAACCGTG
AAGAAACTTTTCAATCTGCCGCAGGATTTCCTGACTAGAAGGGATGCATGGGCTGGGACCTTCGAGAGTGTCGTGAAAAC
CAGAACTGAACCAAGGACAGATTGCCCAGAGACACTTCCGATGCCGACGAGGATACGGCAGACGGACGCGAACGAGGAGG
CGAAGCTGAGCTCGTTCCAGCAGGAGATCGTGCAGCTGGCGGCGGTGCTCAACGGCGACCACCAGCTGACGAGCCTGCAG
GAGAGGATCAGGGACAGGATGAACGTCAGGGAAGGCACCGCCTACATGAGGCGCGCCGTGAGGCGCTTCTTCGAGGCCGG
CTTGTCGGCCAAGAGGATGGGCGTTGCCAACGACGAGCAGATCGTCAAGATGAGGCCCTCGCTCACCACCAGGACCTCCT
CCGACATCGATCAGGAACACCCGTAG
ATGGCGGCTCCCCCTCGCGGCCCCCGGCGCCGGCCGCGACCCCATACCCTCCCCGCCGCCGCCATCCTCGTCCTAAGCCT
CCTCCTCCTCTCACCACCATCCTCCTCCTCCTCGGCGGCGGCGGGGCCGACGAGCCCGATCAAGACGGTGGTGGTGGTGG
TAATGGAGAACCGCTCCTTCGACCACATGCTGGGGTGGATGAAATCCCTGAACCCGGCCATCGACGGCGTCACGGGGGCC
GAATGGAACCCGGCGAACGCCTCCGACCCGTCCTCCCCGCGGGTCTACTTCCGCGACGGCGCGCAGTACGTGGACCCGGA
CCCGGGCCACTCGTACCAGGAGATCCGCCAGCAGGTGTTCGGCTCCGACGACGCCTCCGGCCCCGCCAAGATGAACGGGT
TCGTGCAGCAGGCCACCTCCATCGGTGGCGGCAACATGACCGACGCCGTCATGCACGGCTACAAGCCCGACGCCGTCGCC
GTCTACAAGGAGCTCGTGTCCCAGTTCGCCGTCTGCGACCGATGGTTCGCGTCCGTCCCCTCGTCGACCCAGCCTAACCG
CCTCTTCGTCCACTCCGGTACCTCCGGCGGCGCCACCAGCAACAACCCAGAGTTGCTTGCCGAGGGTTACCCGCAGAGGA
CGATCTTCGACAACATCTACGACGCTGGCCTCTCCTTCGGCGTCTACTTCCAGGACGTGCCGGCGGTGCTCTTCTACCGC
AACCTCCGCAAGATCAAGTACCTCCTCAAGTTCCACCCGTTCCACAACACGTTCCGCGACCACGCCCAGAGCGGCAACCT
GCCAAACTACGCCGTCGTGGAGCAGCATTACATGGACTCCAAGAGCCACCCGGCCAACGACGACCACCCTTCCCACGACG
TCTACCAGGGCCAGATGTTCATCAAGGAGATCTACGAGACCCTGCGTGCCAGCCCCCAGTGGAACGAGACGCTCATGGTC
ATCACCTACGACGAGCATGGCGGGTTCTTCGACCATGTGCCGACTCCTGTCGATAACGTGCCCAGCCCTGACGGCATTGT
TGGTCCTCCGCCTTATAACTTCGAGTTCAACAGGTTGGGGGTGCGCGTCCCGACCATCTTCATCTCCCCGTGGATCGAGA
AGGGAACTGTTGTCCATGGGCCAAATGGAAGTCCAACCCCGAATTCACAGTACGAGCACTCGTCCATCCCTGCAACCGTG
AAGAAACTTTTCAATCTGCCGCAGGATTTCCTGACTAGAAGGGATGCATGGGCTGGGACCTTCGAGAGTGTCGTGAAAAC
CAGAACTGAACCAAGGACAGATTGCCCAGAGACACTTCCGATGCCGACGAGGATACGGCAGACGGACGCGAACGAGGAGG
CGAAGCTGAGCTCGTTCCAGCAGGAGATCGTGCAGCTGGCGGCGGTGCTCAACGGCGACCACCAGCTGACGAGCCTGCAG
GAGAGGATCAGGGACAGGATGAACGTCAGGGAAGGCACCGCCTACATGAGGCGCGCCGTGAGGCGCTTCTTCGAGGCCGG
CTTGTCGGCCAAGAGGATGGGCGTTGCCAACGACGAGCAGATCGTCAAGATGAGGCCCTCGCTCACCACCAGGACCTCCT
CCGACATCGATCAGGAACACCCGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA000088 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR01G38640 | ortholog_one2many | 1 retrogene | |
| Oryza barthii | OBART01G44250 | ortholog_one2one | 2 retrogenes | |
| Oryza glumaepatula | OGLUM01G48550 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G50380 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0381200 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI01G47680 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_bdis_16 | 58.08 | 72.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BRADI2G61140 retrocopies