Parental gene: | LPERR01G38640 |
| Aliases: | None |
| Description: | None |
| Organism: | Leersia perrieri |
| Coordinates: | 1:31868671..31872748(-) |
>LPERR01G38640
ATGGCGGCTCGCCGGCGGCGGCAAGGTTTCGTCGGCCTCCCCGCCGCCACCGTTCTGCTGCTGCTGTTCCTTGCGGCGGC
GGCGGCGGCGGCGGAGAGCCCGATAAAGACGGTGGTGGTGGTGGTGATGGAGAACCGATCATTCGACCACATGCTTGGCT
GGATGAAGCGTCTCAACCCGGAGATCGACGGCGTGACGGGCACCGAGTGGAACCCGAAAAACGCGAGCGATTCGGGCTCG
GATCGCGTCTACTTCGGGGAGGGCGCGGCGTACGTGGACCCGGACCCGGGGCACTCGTTCCAGGAGATCCGGGAGCAGGT
GTTCGGGTCGGACGACGCGTCGGGCCCGGCGACGATGGACGGGTTCGTGCAGCAGGCGAGGTCGCTCGGCGGGGACATGA
CGGGCGCCGTCATGAACGGGTTCTCGCCCGACAGCGTCGCCGTGTACAGGGATCTCGTCGCCGAGTTCGCCGTGTTCGAC
CGGTGGTTCGCGTCTGTTCCGTCGTCGACGCAGCCCAACCGGCTGTTCGTACACTCCGGCACGTCAGGCGGCGCCACCAG
CAACAACCCAGCGTTGCTGGCGAAGGGATACCCACAGCAAACGATCTTCGACAACGTGCACGACGCCGGCCTCTCGTTCG
GCGTCTACTACCAGGACGTCCCGGCCGTGCTCTTCTACCGCAACCTCCGCAAGCTCAAGTACCTAACAAAATTCCACCCA
TTCCACAACGCGTTCCGCGACCACGCCGCCCGGGGCGATCTCCCCAACTACGCCGTGGTGGAGCAGCACTACATGGATTC
GAGGCTGCACCCGGCCAACGACGACCACCCGTCGCACGACGTGTTCCAGGGCCAGATGCTGGTGAAGGAGGTGTACGAGA
CGCTGCGTGCAAGCCCGCAGTGGAACCAGACGCTCATGGTGGTTACATATGACGAGCACGGTGGGTTCTTTGATCATGTG
CCTACGCCCGTGAAGGGTGTTCCTAGCCCTGACGGGATTGTTGGCCCGCCGCCTTATAACTTCACGTTTGATCGGCTTGG
GGTTCGTGTGCCCACCATCGTCATCTCGCCCTGGATCAACAAGGGTACAGTTGTTCATGGGCCAAACGGAAGCCCAACCC
CGACGTCGGAGTACGAGCACTCATCGATCCCAGCAACCGTGAAGAAAATCTTCAATCTTCCACAGGATTTCCTCACCAAA
AGGGACGCCTGGGCAGGAACATTTGAAACCGTCGTTCAAACCAGGACCGAACCAAGAACAGATTGCCCAGAGCAACTTCC
AATGCCGACGAGAATACGTATGACGGAGGCGAACGAGGAGGCGAAGCTGAGTGAGTTCCAGCAGGAGCTCGTGCAGCTGG
CGTCGGTGCTCAATGGGGATCACCAACTGAACAGCCTGCAGGACATGATCAGGGACAGGATGAATGTCAGAGAAGGCATC
GATTACATGCATACTGCTGTAAAACGATTCTTCGAGGCCGGCATGTCTGCCAAGAGGATGGGCGTCGACGACGAGCAGAT
CGTCAAGATGAGGCCATCACTCACCACCAGAACATCGCCTGCGATCGAGCAGCCATAG
ATGGCGGCTCGCCGGCGGCGGCAAGGTTTCGTCGGCCTCCCCGCCGCCACCGTTCTGCTGCTGCTGTTCCTTGCGGCGGC
GGCGGCGGCGGCGGAGAGCCCGATAAAGACGGTGGTGGTGGTGGTGATGGAGAACCGATCATTCGACCACATGCTTGGCT
GGATGAAGCGTCTCAACCCGGAGATCGACGGCGTGACGGGCACCGAGTGGAACCCGAAAAACGCGAGCGATTCGGGCTCG
GATCGCGTCTACTTCGGGGAGGGCGCGGCGTACGTGGACCCGGACCCGGGGCACTCGTTCCAGGAGATCCGGGAGCAGGT
GTTCGGGTCGGACGACGCGTCGGGCCCGGCGACGATGGACGGGTTCGTGCAGCAGGCGAGGTCGCTCGGCGGGGACATGA
CGGGCGCCGTCATGAACGGGTTCTCGCCCGACAGCGTCGCCGTGTACAGGGATCTCGTCGCCGAGTTCGCCGTGTTCGAC
CGGTGGTTCGCGTCTGTTCCGTCGTCGACGCAGCCCAACCGGCTGTTCGTACACTCCGGCACGTCAGGCGGCGCCACCAG
CAACAACCCAGCGTTGCTGGCGAAGGGATACCCACAGCAAACGATCTTCGACAACGTGCACGACGCCGGCCTCTCGTTCG
GCGTCTACTACCAGGACGTCCCGGCCGTGCTCTTCTACCGCAACCTCCGCAAGCTCAAGTACCTAACAAAATTCCACCCA
TTCCACAACGCGTTCCGCGACCACGCCGCCCGGGGCGATCTCCCCAACTACGCCGTGGTGGAGCAGCACTACATGGATTC
GAGGCTGCACCCGGCCAACGACGACCACCCGTCGCACGACGTGTTCCAGGGCCAGATGCTGGTGAAGGAGGTGTACGAGA
CGCTGCGTGCAAGCCCGCAGTGGAACCAGACGCTCATGGTGGTTACATATGACGAGCACGGTGGGTTCTTTGATCATGTG
CCTACGCCCGTGAAGGGTGTTCCTAGCCCTGACGGGATTGTTGGCCCGCCGCCTTATAACTTCACGTTTGATCGGCTTGG
GGTTCGTGTGCCCACCATCGTCATCTCGCCCTGGATCAACAAGGGTACAGTTGTTCATGGGCCAAACGGAAGCCCAACCC
CGACGTCGGAGTACGAGCACTCATCGATCCCAGCAACCGTGAAGAAAATCTTCAATCTTCCACAGGATTTCCTCACCAAA
AGGGACGCCTGGGCAGGAACATTTGAAACCGTCGTTCAAACCAGGACCGAACCAAGAACAGATTGCCCAGAGCAACTTCC
AATGCCGACGAGAATACGTATGACGGAGGCGAACGAGGAGGCGAAGCTGAGTGAGTTCCAGCAGGAGCTCGTGCAGCTGG
CGTCGGTGCTCAATGGGGATCACCAACTGAACAGCCTGCAGGACATGATCAGGGACAGGATGAATGTCAGAGAAGGCATC
GATTACATGCATACTGCTGTAAAACGATTCTTCGAGGCCGGCATGTCTGCCAAGAGGATGGGCGTCGACGACGAGCAGAT
CGTCAAGATGAGGCCATCACTCACCACCAGAACATCGCCTGCGATCGAGCAGCCATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA000088 | ortholog_one2many | 1 retrogene | |
| Brachypodium distachyon | BRADI2G61140 | ortholog_one2many | 1 retrogene | |
| Oryza barthii | OBART01G44250 | ortholog_one2many | 2 retrogenes | |
| Oryza glumaepatula | OGLUM01G48550 | ortholog_one2many | 1 retrogene | |
| Oryza nivara | ONIVA01G50380 | ortholog_one2many | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0381200 | ortholog_one2many | 1 retrogene | |
| Oryza rufipogon | ORUFI01G47680 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lper_20 | 50.97 | 76.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all LPERR01G38640 retrocopies