Parental gene:

LPERR01G38640

Aliases:None
Description:None
Organism:Leersia perrieri
Coordinates:1:31868671..31872748(-)


>LPERR01G38640
ATGGCGGCTCGCCGGCGGCGGCAAGGTTTCGTCGGCCTCCCCGCCGCCACCGTTCTGCTGCTGCTGTTCCTTGCGGCGGC
GGCGGCGGCGGCGGAGAGCCCGATAAAGACGGTGGTGGTGGTGGTGATGGAGAACCGATCATTCGACCACATGCTTGGCT
GGATGAAGCGTCTCAACCCGGAGATCGACGGCGTGACGGGCACCGAGTGGAACCCGAAAAACGCGAGCGATTCGGGCTCG
GATCGCGTCTACTTCGGGGAGGGCGCGGCGTACGTGGACCCGGACCCGGGGCACTCGTTCCAGGAGATCCGGGAGCAGGT
GTTCGGGTCGGACGACGCGTCGGGCCCGGCGACGATGGACGGGTTCGTGCAGCAGGCGAGGTCGCTCGGCGGGGACATGA
CGGGCGCCGTCATGAACGGGTTCTCGCCCGACAGCGTCGCCGTGTACAGGGATCTCGTCGCCGAGTTCGCCGTGTTCGAC
CGGTGGTTCGCGTCTGTTCCGTCGTCGACGCAGCCCAACCGGCTGTTCGTACACTCCGGCACGTCAGGCGGCGCCACCAG
CAACAACCCAGCGTTGCTGGCGAAGGGATACCCACAGCAAACGATCTTCGACAACGTGCACGACGCCGGCCTCTCGTTCG
GCGTCTACTACCAGGACGTCCCGGCCGTGCTCTTCTACCGCAACCTCCGCAAGCTCAAGTACCTAACAAAATTCCACCCA
TTCCACAACGCGTTCCGCGACCACGCCGCCCGGGGCGATCTCCCCAACTACGCCGTGGTGGAGCAGCACTACATGGATTC
GAGGCTGCACCCGGCCAACGACGACCACCCGTCGCACGACGTGTTCCAGGGCCAGATGCTGGTGAAGGAGGTGTACGAGA
CGCTGCGTGCAAGCCCGCAGTGGAACCAGACGCTCATGGTGGTTACATATGACGAGCACGGTGGGTTCTTTGATCATGTG
CCTACGCCCGTGAAGGGTGTTCCTAGCCCTGACGGGATTGTTGGCCCGCCGCCTTATAACTTCACGTTTGATCGGCTTGG
GGTTCGTGTGCCCACCATCGTCATCTCGCCCTGGATCAACAAGGGTACAGTTGTTCATGGGCCAAACGGAAGCCCAACCC
CGACGTCGGAGTACGAGCACTCATCGATCCCAGCAACCGTGAAGAAAATCTTCAATCTTCCACAGGATTTCCTCACCAAA
AGGGACGCCTGGGCAGGAACATTTGAAACCGTCGTTCAAACCAGGACCGAACCAAGAACAGATTGCCCAGAGCAACTTCC
AATGCCGACGAGAATACGTATGACGGAGGCGAACGAGGAGGCGAAGCTGAGTGAGTTCCAGCAGGAGCTCGTGCAGCTGG
CGTCGGTGCTCAATGGGGATCACCAACTGAACAGCCTGCAGGACATGATCAGGGACAGGATGAATGTCAGAGAAGGCATC
GATTACATGCATACTGCTGTAAAACGATTCTTCGAGGCCGGCATGTCTGCCAAGAGGATGGGCGTCGACGACGAGCAGAT
CGTCAAGATGAGGCCATCACTCACCACCAGAACATCGCCTGCGATCGAGCAGCCATAG

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA000088 ortholog_one2many 1 retrogene
retro_oind_49,
Brachypodium distachyon BRADI2G61140 ortholog_one2many 1 retrogene
retro_bdis_16,
Oryza barthii OBART01G44250 ortholog_one2many 2 retrogenes
retro_obar_19, retro_obar_5,
Oryza glumaepatula OGLUM01G48550 ortholog_one2many 1 retrogene
retro_oglu_24,
Oryza nivara ONIVA01G50380 ortholog_one2many 1 retrogene
retro_oniv_1,
Oryza glaberrima ORGLA01G0381200 ortholog_one2many 1 retrogene
retro_ogla_34,
Oryza rufipogon ORUFI01G47680 ortholog_one2many 2 retrogenes
retro_oruf_3, retro_oruf_32,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lper_20 50.97 76.76
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Download FASTA sequences of all LPERR01G38640 retrocopies