Parental gene:

UBE2E1, ENSAMEG00000003515

Aliases:None
Description:ubiquitin-conjugating enzyme E2E 1 [Source:HGNC Symbol;Acc:12477]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192976.1:55324..128038(-)


>ENSAMEG00000003515
GCTATGTCGGATGACGATTCGAGGGCCAGCACCAGCTCCTCCTCATCTTCGTCCTCCAACCAGCAAACCGAGAAAGAAAC
AAACACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCTACCAGCGCCAAGAGGATTC
AGAAGGAACTGGCAGACATCACTTTAGATCCTCCACCTAACTGCAGTGCTGGTCCCAAAGGTGATAACATCTATGAATGG
AGATCAACCATTCTGGGGCCTCCAGGATCCGTGTATGAGGGTGGTGTATTCTTCCTTGATATCACTTTTACGCCAGAATA
CCCCTTCAAGCCTCCAAAGGTTACATTTCGGACAAGAATCTATCATTGTAATATTAACAGTCAAGGAGTTATTTGCTTGG
ACATATTAAAAGATAATTGGAGTCCAGCACTAACCATTTCTAAAGTTCTCCTTTCTATCTGCTCCCTTCTTACAGACTGT
AATCCTGCTGACCCTTTGGTGGGAAGTATTGCCACTCAGTATATGACCAACAGAGCAGAACATGACAGAATGGCCAGACA
GTGGACCAAGAGATACGCTACA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011216 other_paralog 6 retrogenes
retro_amel_1295, retro_amel_1427, retro_amel_1648, retro_amel_1750, retro_amel_620, retro_amel_995,
Ailuropoda melanoleuca ENSAMEG00000014519 other_paralog 1 retrogene
retro_amel_1385,
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Cavia porcellus ENSCPOG00000002251 ortholog_one2many 2 retrogenes
retro_cpor_1036, retro_cpor_52,
Felis catus ENSFCAG00000024719 ortholog_one2one 1 retrogene
retro_fcat_623,
Macropus eugenii ENSMEUG00000014517 ortholog_one2one 1 retrogene
retro_meug_2089,
Mus musculus ENSMUSG00000021774 ortholog_one2one 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Oryctolagus cuniculus ENSOCUG00000006026 ortholog_one2one 2 retrogenes
retro_ocun_134, retro_ocun_243,
Rattus norvegicus ENSRNOG00000008794 ortholog_one2one 3 retrogenes
retro_rnor_1632, retro_rnor_2291, retro_rnor_2343,
Sarcophilus harrisii ENSSHAG00000001416 ortholog_one2one 1 retrogene
retro_shar_712,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_483 65.59 94.33
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2. retro_amel_1117 60.49 82.99
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Download FASTA sequences of all ENSAMEG00000003515 retrocopies