Parental gene:

TAGLN2, ENSBTAG00000002068

Aliases:None
Description:Transgelin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5E9F5]
Organism:Cow (Bos taurus)
Coordinates:3:9878838..9886647(+)


>ENSBTAG00000002068
ATGGCCAACAGGGGACCTGCCTACGGCCTGAGCCGGGAGGTACAGCAGAAGATTGAGAAACAGTACGATGCGGACCTGGA
GCAAATCCTGATCCAGTGGATCACCACCCAGTGCCGCAAGGATGTGGGCCGGCCCCAGCCTGGGCGCGAGAACTTCCAGA
ACTGGCTCAAGGATGGCACGGTGCTGTGTGAGCTCATTAATGGGCTGTACCCCGAGGGGCAGGCCCCGGTGAAGAAGATC
CAGGCCTCCACCATGGCCTTCAAGCAGATGGAGCAGATCTCCCAGTTCCTGCAAGCAGCCGAGCGCTATGGCATCAACAC
CACTGACATCTTCCAGACTGTGGACCTCTGGGAAGGAAAGAACATGGCCTGTGTGCAGCGGACACTGATGAATCTGGGCG
GGCTGGCGGTAGCCCGGGATGATGGGCTCTTCTCTGGGGATCCTAACTGGTTTCCCAAGAAATCCAAGGAGAACCCTCGG
TACTTCTCGGACAACCAACTGCAGGAGGGCAAGAATGTGATTGGCTTACAGATGGGGACCAACCGCGGGGCTTCTCAGGC
AGGCATGACCGGCTACGGGATGCCGCGCCAGATCCTCTGA

Library Parental gene expression (RPM)
ERP005899_liver 36 .84 RPM
ERP005899_muscle 183 .60 RPM
SRP017611_brain 29 .78 RPM
SRP017611_kidney 225 .05 RPM
SRP017611_liver 81 .70 RPM
SRP030211_testis 61 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020345 within_species_paralog 1 retrogene
retro_btau_1211,
Bos taurus ENSBTAG00000020764 within_species_paralog 1 retrogene
retro_btau_612,
Callithrix jacchus ENSCJAG00000006156 ortholog_one2one 2 retrogenes
retro_cjac_2035, retro_cjac_2444,
Homo sapiens ENSG00000158710 ortholog_one2one 1 retrogene
retro_hsap_4108,
Macropus eugenii ENSMEUG00000006573 ortholog_one2one 9 retrogenes
retro_meug_1092, retro_meug_1242, retro_meug_128, retro_meug_1442, retro_meug_1998, retro_meug_309, retro_meug_483, retro_meug_690, retro_meug_880,
Myotis lucifugus ENSMLUG00000026228 ortholog_one2many 1 retrogene
retro_mluc_274,
Macaca mulatta ENSMMUG00000004705 ortholog_one2one 1 retrogene
retro_mmul_2328,
Monodelphis domestica ENSMODG00000010032 ortholog_one2one 1 retrogene
retro_mdom_1178,
Nomascus leucogenys ENSNLEG00000013350 ortholog_one2one 1 retrogene
retro_nleu_575,
Pongo abelii ENSPPYG00000000648 ortholog_one2one 2 retrogenes
retro_pabe_3310, retro_pabe_3364,
Pan troglodytes ENSPTRG00000001533 ortholog_one2one 1 retrogene
retro_ptro_2788,
Sus scrofa ENSSSCG00000006395 ortholog_one2one 2 retrogenes
retro_sscr_312, retro_sscr_313,
Tarsius syrichta ENSTSYG00000001645 ortholog_one2one 2 retrogenes
retro_tsyr_1911, retro_tsyr_950,
Tursiops truncatus ENSTTRG00000001814 ortholog_one2one 1 retrogene
retro_ttru_1614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1701 88.94 100.00
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Download FASTA sequences of all ENSBTAG00000002068 retrocopies