Parental gene:

MMU.3153, ENSMMUG00000004705

Aliases:None
Description:transgelin-2 [Source:RefSeq peptide;Acc:NP_001252829]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:138533593..138535536(-)


>ENSMMUG00000004705
ATGGCTAACAGGGGACCTGCATATGGCCTGAGCCGGGAGGTGCAGCAGAAGATTGAGAAACAGTATGATGCAGATCTGGA
GCAGATCCTGATCCAGTGGATCACCACCCAGTGCCGAAAGGATGTGGGCCGGCCCCAGCCTGGACGCGAGAACTTCCAGA
ACTGGCTCAAGGATGGCACGGTGCTATGCGAGCTCATTAATGCACTGTACCCCGAGGGGCAGGCCCCAGTAAAGAAGATC
CAGGCCTCCACCATGGCCTTCAAGCAGATGGAGCAGATCTCTCAGTTCCTGCAAGCAGCTGAGCGCTATGGCATTAACAC
CACCGACATCTTCCAAACTGTGGACCTCTGGGAAGGAAAGAACATGGCCTGTGTGCAGCGGACGCTGATGAATCTGGGTG
GGCTGGCAGTAGCGCGGGATGATGGACTCTTCTCTGGGGATCCCAACTGGTTCCCTAAGAAATCCAAGGAGAATCCTCGG
AACTTTTCGGACAACCAGCTGCAAGAGGGCAAGAACGTGATCGGGTTACAGATGGGCACCAACCGCGGGGCATCTCAGGC
AGGCATGACTGGCTACGGGATGCCACGCCAGATCCTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .09 RPM
SRP007412_brain 9 .86 RPM
SRP007412_cerebellum 3 .94 RPM
SRP007412_heart 74 .14 RPM
SRP007412_kidney 92 .84 RPM
SRP007412_liver 51 .14 RPM
SRP007412_testis 10 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002068 ortholog_one2one 1 retrogene
retro_btau_1701,
Callithrix jacchus ENSCJAG00000006156 ortholog_one2one 2 retrogenes
retro_cjac_2035, retro_cjac_2444,
Homo sapiens ENSG00000158710 ortholog_one2one 1 retrogene
retro_hsap_4108,
Macropus eugenii ENSMEUG00000006573 ortholog_one2one 9 retrogenes
retro_meug_1092, retro_meug_1242, retro_meug_128, retro_meug_1442, retro_meug_1998, retro_meug_309, retro_meug_483, retro_meug_690, retro_meug_880,
Myotis lucifugus ENSMLUG00000026228 ortholog_one2many 1 retrogene
retro_mluc_274,
Macaca mulatta ENSMMUG00000001690 within_species_paralog 1 retrogene
retro_mmul_1747,
Macaca mulatta ENSMMUG00000015306 within_species_paralog 1 retrogene
retro_mmul_1131,
Monodelphis domestica ENSMODG00000010032 ortholog_one2one 1 retrogene
retro_mdom_1178,
Nomascus leucogenys ENSNLEG00000013350 ortholog_one2one 1 retrogene
retro_nleu_575,
Pongo abelii ENSPPYG00000000648 ortholog_one2one 2 retrogenes
retro_pabe_3310, retro_pabe_3364,
Pan troglodytes ENSPTRG00000001533 ortholog_one2one 1 retrogene
retro_ptro_2788,
Sus scrofa ENSSSCG00000006395 ortholog_one2one 2 retrogenes
retro_sscr_312, retro_sscr_313,
Tarsius syrichta ENSTSYG00000001645 ortholog_one2one 2 retrogenes
retro_tsyr_1911, retro_tsyr_950,
Tursiops truncatus ENSTTRG00000001814 ortholog_one2one 1 retrogene
retro_ttru_1614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2328 77.51 84.42
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Download FASTA sequences of all ENSMMUG00000004705 retrocopies