Parental gene:

FAM92A1, ENSCAFG00000009105

Aliases:None
Description:family with sequence similarity 92, member A1 [Source:HGNC Symbol;Acc:30452]
Organism:Dog (Canis familiaris)
Coordinates:29:38603941..38630158(+)


>ENSCAFG00000009105
CGTTTTGTGTCCCCCTTTTTCCCCAGGGACACTCAAACCAGACAACTGCAAGATGCTGTCACAAATGTGGAGAAGCACTT
CGGGGAGCTGTGCCAAATCTTTGCTGCTTATGTGCGGAAAACGGCCAGGCTGCGAGACAAAGCGGACCTCCTGGTGAATG
AGATCAACGTGTACGCCTCCACAGAGACCCCAAATTTAAAGCAGGGCCTGAAAAACTTTGCTGATGAGTTTGCCAGACTT
CAGGATTACCGACAGGCAGAGGTTGAAAGACTTGAAGCCAAAGTAGTTGAACCTTTGAAAGCTTATGGAACCATTGTAAA
AATGAAACGAGATGACCTCAAAGCAACATTAACAGCAAGGAATCGAGAAGCTAAGCAGTTAAATCAGTTAGAACGAACAC
GTCAGCGAAACCCATCTGATCGACATGTTATTTCACAGGCAGAAACTGAATTGCAGAGAGCTACGATGGATGCTACCCGG
ACAACTCGTCATCTGGAGGAGACTATTGACAATTTTGAAAAGCAGAAAATAAAGGATATAAAGACTATATTTTCAGAATT
TATCACTATTGAAATGTTATTTCATGGCAAAGCTTTAGAGGTCTACACTGCTGCCTACCAAAACATACAAAAGATTGACG
AAGAAGAAGATTTGGAGGCTTTCCGAAATTCTCTGTATCCACCAGATTATTCATCTCGTCTAGACATTGTAAGAGCAAAT
TCAAAGTCGCCTCTTCAAAGATCACTGTCAGCTAAGTGTCTATCTGGAACAGGACAGGTATCCACCTGTCAACTAAGAAA
GGATCAACAAGCAGAGGATGATGATGAAGAGGATGAAGACTTGGATGTTACAGAAGAAAATTAA

Library Parental gene expression (RPM)
SRP017611_brain 18 .97 RPM
SRP017611_kidney 27 .93 RPM
SRP017611_liver 2 .97 RPM
SRP012049_cerebellum 16 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000013003 ortholog_one2many 1 retrogene
retro_etel_522,
Homo sapiens ENSG00000188343 ortholog_one2one 1 retrogene
retro_hsap_1485,
Gorilla gorilla ENSGGOG00000006452 ortholog_one2one 1 retrogene
retro_ggor_1137,
Loxodonta africana ENSLAFG00000003954 ortholog_one2one 1 retrogene
retro_lafr_201,
Microcebus murinus ENSMICG00000006797 ortholog_one2one 1 retrogene
retro_mmur_415,
Monodelphis domestica ENSMODG00000007447 ortholog_one2many 2 retrogenes
retro_mdom_1239, retro_mdom_827,
Mustela putorius furo ENSMPUG00000009112 ortholog_one2one 1 retrogene
retro_mputfur_1183,
Nomascus leucogenys ENSNLEG00000002773 ortholog_one2one 1 retrogene
retro_nleu_1707,
Otolemur garnettii ENSOGAG00000002972 ortholog_one2one 1 retrogene
retro_ogar_654,
Oreochromis niloticus ENSONIG00000002446 ortholog_one2one 1 retrogene
retro_onil_57,
Procavia capensis ENSPCAG00000011171 ortholog_one2many 1 retrogene
retro_pcap_272,
Pongo abelii ENSPPYG00000018744 ortholog_one2one 2 retrogenes
retro_pabe_1235, retro_pabe_2497,
Tarsius syrichta ENSTSYG00000012502 ortholog_one2one 1 retrogene
retro_tsyr_975,
Tursiops truncatus ENSTTRG00000012378 ortholog_one2one 1 retrogene
retro_ttru_45,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1072 64.13 63.41
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Download FASTA sequences of all ENSCAFG00000009105 retrocopies