Parental gene: | FAM92A1, ENSPPYG00000018744 |
| Aliases: | None |
| Description: | family with sequence similarity 92, member A1 [Source:HGNC Symbol;Acc:30452] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 8:99979314..100004297(+) |
>ENSPPYG00000018744
AGAAACGCCCGGGCTGGCGCGGCGGCGCGAGGGGCGGGCTCTCAGGTTCCCGGCGGCTGCTTGCGCCCCAGCGCGCGCCC
AGGCGCCTTGGAATCCCCGTCCTTGGGCCCCCGCAAGGTCCCCGGCCGTGCGCGAGGCAGCGCGATGAGGCGCACCCTGG
AAAACCGGAACGCTCAAACGAAACAACTGCAAACAGCTGTCTCAAATGTGGAGAAGCATTTTGGAGAACTGTGCCAAATC
TTCGCTGCCTATGTGCGGAAAACTGCCAGGCTGAGAGACAAAGCAGACCTCCTGGTGAATGAAATCAACGCGTATGCTGC
TACAGAGACCCCGCATTTAAAGCTGGGCCTGATGAACTTTGCAGATGAGTTTGCCAAACTTCAGGATTATCGACAAGCAG
AGGTTGAAAGACTTGAAGCCAAAGTAGTTGAACCCTTGAAAACTTATGGGACCATTGTGAAAATGAAACGGGATGACCTC
AAAGCAACACTCACAGCAAGGAATCGAGAAGCTAAGCAATTAACTCAGTTAGAAAGAACACGTCAGCGAAACCCATCTGA
TCGACATGTTATTGTATCCGCAGAAACGGAATTACAGAGAGCTGCAATGGATGCTAGCCGAACAAGTCGTCATCTGGAGG
AAACTATTAACAACTTTGAAAGGCAGAAAATGAAGGATATAAAGACTATATTTTCTGAATTTATCACAATCGAAATGTTA
TTTCACGGCAAAGCTTTAGAGGTCTACACTGCTGCCTACCAGAATATACAAAACATTGATGAAGATGAAGATTTAGAGGT
TTTCCGAAATTCTCTGTATGCACCAGATTATTCATCTCGTTTAGATATTGTAAGAGCAAATTCAAAGTCACCTCTTCAGA
GATCACTGTCAGCTAAGTGTGTATCTGGAACAGGACAG
AGAAACGCCCGGGCTGGCGCGGCGGCGCGAGGGGCGGGCTCTCAGGTTCCCGGCGGCTGCTTGCGCCCCAGCGCGCGCCC
AGGCGCCTTGGAATCCCCGTCCTTGGGCCCCCGCAAGGTCCCCGGCCGTGCGCGAGGCAGCGCGATGAGGCGCACCCTGG
AAAACCGGAACGCTCAAACGAAACAACTGCAAACAGCTGTCTCAAATGTGGAGAAGCATTTTGGAGAACTGTGCCAAATC
TTCGCTGCCTATGTGCGGAAAACTGCCAGGCTGAGAGACAAAGCAGACCTCCTGGTGAATGAAATCAACGCGTATGCTGC
TACAGAGACCCCGCATTTAAAGCTGGGCCTGATGAACTTTGCAGATGAGTTTGCCAAACTTCAGGATTATCGACAAGCAG
AGGTTGAAAGACTTGAAGCCAAAGTAGTTGAACCCTTGAAAACTTATGGGACCATTGTGAAAATGAAACGGGATGACCTC
AAAGCAACACTCACAGCAAGGAATCGAGAAGCTAAGCAATTAACTCAGTTAGAAAGAACACGTCAGCGAAACCCATCTGA
TCGACATGTTATTGTATCCGCAGAAACGGAATTACAGAGAGCTGCAATGGATGCTAGCCGAACAAGTCGTCATCTGGAGG
AAACTATTAACAACTTTGAAAGGCAGAAAATGAAGGATATAAAGACTATATTTTCTGAATTTATCACAATCGAAATGTTA
TTTCACGGCAAAGCTTTAGAGGTCTACACTGCTGCCTACCAGAATATACAAAACATTGATGAAGATGAAGATTTAGAGGT
TTTCCGAAATTCTCTGTATGCACCAGATTATTCATCTCGTTTAGATATTGTAAGAGCAAATTCAAAGTCACCTCTTCAGA
GATCACTGTCAGCTAAGTGTGTATCTGGAACAGGACAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .85 RPM |
| SRP007412_cerebellum | 8 .39 RPM |
| SRP007412_heart | 3 .64 RPM |
| SRP007412_kidney | 3 .88 RPM |
| SRP007412_liver | 3 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009105 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013003 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000188343 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006452 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003954 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006797 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007447 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000009112 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002773 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002972 | ortholog_one2one | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000002446 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000011171 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012502 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012378 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1235 | 94.46 | 88.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2497 | 76.40 | 57.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018744 retrocopies