Parental gene: | ENSCAFG00000016095 |
| Aliases: | None |
| Description: | Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F1Q2N5] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 4:34630336..34662717(-) |
>ENSCAFG00000016095
GGCTTCTTCGACCGCGGCGCCAGCATCGTGGAGGACAAGCTGGTGGAGGACCTGCGGACGCGCGAGAGCGAGGAGCAGCG
GCGGAACCGGGTGCGCGGCATCCTGCGCATCATCAAGCCCTGCAACCATGTGCTCAGCCTGTCCTTCCCCATCCGCCGCG
ACGACGGCTCCTGGGAGGTCATCGAGGGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGT
TACAGCACTGATGTGAGTGTGGACGAAGTGAAAGCTCTGGCTTCTCTGATGACCTACAAGTGTGCAGTGGTTGATGTGCC
ATTTGGGGGTGCCAAGGCTGGTGTTAAGATCAATCCCAAAAACTACACTGATAATGAATTGGAAAAGATTACAAGGAGGT
TTACCATGGAGCTGGCAAAGAAGGGCTTTATTGGTCCTGGCATTGATGTGCCTGCCCCAGACATGAGCACAGGTGAGCGG
GAGATGTCCTGGATTGCTGACACCTACGCCAGCACCATAGGGCACTATGATATTAATGCCCATGCCTGTGTTACGGGTAA
GCCCATCAGTCAAGGTGGGATCCACGGGCGGATCTCTGCAACTGGCCGGGGAGTCTTCCATGGGATTGAAAATTTCATCA
ATGAAGCATCTTACATGAGTATTTTAGGAATGACACCAGGGTTTGGAGATAAAACGTTTGTTGTTCAGGGATTTGGTAAC
GTGGGCCTGCACTCTATGAGATACTTACATCGTTTTGGTGCTAAATGTGTTGGTGTTGGTGAATCTGATGGGAGCATATG
GAATCCAGATGGTATTGACCCAAAGGAACTGGAAGACTTCAAATTGCAACATGGATCAATCCTGGGCTTCCCCAAGGCAA
AGCCCTATGAAGGGAGCATCTTGGAAGCTGATTGTGACATCCTGATCCCCGCTGCCAGCGAGAAGCAGCTGACCAAGTCC
AATGCACCCAGAGTCAAAGCCAAGATCATTGCTGAGGGTGCCAATGGACCAACAACCCCAGAGGCCGATAAGATCTTCCT
GGAGAGGAACATCATGGTGATTCCAGACCTCTACTTGAATGCTGGAGGAGTGACAGTGTCTTACTTTGAGTGGCTGAAGA
ATCTGAATCACGTCAGCTATGGCCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTCATGTCTGTTCAA
GAGAGCTTGGAAAGGAAATTTGGAAAGCATGGTGGAACTATTCCCGTTGTGCCCACAGCAGAATTCCAAGACAGGATATC
GGGCGCCTCTGAGAAGGACATCGTGCACTCTGGCCTAGCTTACACCATGGAGCGCTCCGCCCGGCAAATCATGCGCACGG
CCATGAAGTACAACCTGGGCTTGGATCTGAGAACGGCCGCCTACGTCAATGCCATTGAGAAGGTCTTCAAGGTCTACAAT
GAAGCTGGGGTGACCTTCACATAG
GGCTTCTTCGACCGCGGCGCCAGCATCGTGGAGGACAAGCTGGTGGAGGACCTGCGGACGCGCGAGAGCGAGGAGCAGCG
GCGGAACCGGGTGCGCGGCATCCTGCGCATCATCAAGCCCTGCAACCATGTGCTCAGCCTGTCCTTCCCCATCCGCCGCG
ACGACGGCTCCTGGGAGGTCATCGAGGGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGT
TACAGCACTGATGTGAGTGTGGACGAAGTGAAAGCTCTGGCTTCTCTGATGACCTACAAGTGTGCAGTGGTTGATGTGCC
ATTTGGGGGTGCCAAGGCTGGTGTTAAGATCAATCCCAAAAACTACACTGATAATGAATTGGAAAAGATTACAAGGAGGT
TTACCATGGAGCTGGCAAAGAAGGGCTTTATTGGTCCTGGCATTGATGTGCCTGCCCCAGACATGAGCACAGGTGAGCGG
GAGATGTCCTGGATTGCTGACACCTACGCCAGCACCATAGGGCACTATGATATTAATGCCCATGCCTGTGTTACGGGTAA
GCCCATCAGTCAAGGTGGGATCCACGGGCGGATCTCTGCAACTGGCCGGGGAGTCTTCCATGGGATTGAAAATTTCATCA
ATGAAGCATCTTACATGAGTATTTTAGGAATGACACCAGGGTTTGGAGATAAAACGTTTGTTGTTCAGGGATTTGGTAAC
GTGGGCCTGCACTCTATGAGATACTTACATCGTTTTGGTGCTAAATGTGTTGGTGTTGGTGAATCTGATGGGAGCATATG
GAATCCAGATGGTATTGACCCAAAGGAACTGGAAGACTTCAAATTGCAACATGGATCAATCCTGGGCTTCCCCAAGGCAA
AGCCCTATGAAGGGAGCATCTTGGAAGCTGATTGTGACATCCTGATCCCCGCTGCCAGCGAGAAGCAGCTGACCAAGTCC
AATGCACCCAGAGTCAAAGCCAAGATCATTGCTGAGGGTGCCAATGGACCAACAACCCCAGAGGCCGATAAGATCTTCCT
GGAGAGGAACATCATGGTGATTCCAGACCTCTACTTGAATGCTGGAGGAGTGACAGTGTCTTACTTTGAGTGGCTGAAGA
ATCTGAATCACGTCAGCTATGGCCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTCATGTCTGTTCAA
GAGAGCTTGGAAAGGAAATTTGGAAAGCATGGTGGAACTATTCCCGTTGTGCCCACAGCAGAATTCCAAGACAGGATATC
GGGCGCCTCTGAGAAGGACATCGTGCACTCTGGCCTAGCTTACACCATGGAGCGCTCCGCCCGGCAAATCATGCGCACGG
CCATGAAGTACAACCTGGGCTTGGATCTGAGAACGGCCGCCTACGTCAATGCCATTGAGAAGGTCTTCAAGGTCTACAAT
GAAGCTGGGGTGACCTTCACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 205 .15 RPM |
| SRP017611_kidney | 272 .54 RPM |
| SRP017611_liver | 737 .46 RPM |
| SRP012049_cerebellum | 239 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007540 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001101 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011633 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000009767 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000007371 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000019638 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000148672 | ortholog_many2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015770 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012059 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016526 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002756 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011658 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003641 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000008662 | ortholog_many2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002827 | ortholog_many2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000002711 | ortholog_one2many | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012843 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001578 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008145 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_747 | 95.86 | 64.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000016095 retrocopies