Parental gene:

ENSCAFG00000016095

Aliases:None
Description:Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F1Q2N5]
Organism:Dog (Canis familiaris)
Coordinates:4:34630336..34662717(-)


>ENSCAFG00000016095
GGCTTCTTCGACCGCGGCGCCAGCATCGTGGAGGACAAGCTGGTGGAGGACCTGCGGACGCGCGAGAGCGAGGAGCAGCG
GCGGAACCGGGTGCGCGGCATCCTGCGCATCATCAAGCCCTGCAACCATGTGCTCAGCCTGTCCTTCCCCATCCGCCGCG
ACGACGGCTCCTGGGAGGTCATCGAGGGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGT
TACAGCACTGATGTGAGTGTGGACGAAGTGAAAGCTCTGGCTTCTCTGATGACCTACAAGTGTGCAGTGGTTGATGTGCC
ATTTGGGGGTGCCAAGGCTGGTGTTAAGATCAATCCCAAAAACTACACTGATAATGAATTGGAAAAGATTACAAGGAGGT
TTACCATGGAGCTGGCAAAGAAGGGCTTTATTGGTCCTGGCATTGATGTGCCTGCCCCAGACATGAGCACAGGTGAGCGG
GAGATGTCCTGGATTGCTGACACCTACGCCAGCACCATAGGGCACTATGATATTAATGCCCATGCCTGTGTTACGGGTAA
GCCCATCAGTCAAGGTGGGATCCACGGGCGGATCTCTGCAACTGGCCGGGGAGTCTTCCATGGGATTGAAAATTTCATCA
ATGAAGCATCTTACATGAGTATTTTAGGAATGACACCAGGGTTTGGAGATAAAACGTTTGTTGTTCAGGGATTTGGTAAC
GTGGGCCTGCACTCTATGAGATACTTACATCGTTTTGGTGCTAAATGTGTTGGTGTTGGTGAATCTGATGGGAGCATATG
GAATCCAGATGGTATTGACCCAAAGGAACTGGAAGACTTCAAATTGCAACATGGATCAATCCTGGGCTTCCCCAAGGCAA
AGCCCTATGAAGGGAGCATCTTGGAAGCTGATTGTGACATCCTGATCCCCGCTGCCAGCGAGAAGCAGCTGACCAAGTCC
AATGCACCCAGAGTCAAAGCCAAGATCATTGCTGAGGGTGCCAATGGACCAACAACCCCAGAGGCCGATAAGATCTTCCT
GGAGAGGAACATCATGGTGATTCCAGACCTCTACTTGAATGCTGGAGGAGTGACAGTGTCTTACTTTGAGTGGCTGAAGA
ATCTGAATCACGTCAGCTATGGCCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTCATGTCTGTTCAA
GAGAGCTTGGAAAGGAAATTTGGAAAGCATGGTGGAACTATTCCCGTTGTGCCCACAGCAGAATTCCAAGACAGGATATC
GGGCGCCTCTGAGAAGGACATCGTGCACTCTGGCCTAGCTTACACCATGGAGCGCTCCGCCCGGCAAATCATGCGCACGG
CCATGAAGTACAACCTGGGCTTGGATCTGAGAACGGCCGCCTACGTCAATGCCATTGAGAAGGTCTTCAAGGTCTACAAT
GAAGCTGGGGTGACCTTCACATAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 239 .81 RPM
SRP017611_brain 205 .15 RPM
SRP017611_kidney 272 .54 RPM
SRP017611_liver 737 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007540 ortholog_one2many 2 retrogenes
retro_btau_1413, retro_btau_1741,
Choloepus hoffmanni ENSCHOG00000001101 possible_ortholog 1 retrogene
retro_chof_2002,
Callithrix jacchus ENSCJAG00000011633 ortholog_one2many 1 retrogene
retro_cjac_2830,
Dipodomys ordii ENSDORG00000009767 ortholog_one2many 1 retrogene
retro_dord_400,
Equus caballus ENSECAG00000007371 ortholog_one2many 2 retrogenes
retro_ecab_886, retro_ecab_919,
Echinops telfairi ENSETEG00000019638 ortholog_one2many 2 retrogenes
retro_etel_141, retro_etel_2024,
Homo sapiens ENSG00000148672 ortholog_many2many 1 retrogene
retro_hsap_31,
Gorilla gorilla ENSGGOG00000015770 ortholog_one2many 1 retrogene
retro_ggor_2954,
Loxodonta africana ENSLAFG00000012059 ortholog_one2many 1 retrogene
retro_lafr_504,
Microcebus murinus ENSMICG00000016526 ortholog_one2many 1 retrogene
retro_mmur_524,
Monodelphis domestica ENSMODG00000002756 ortholog_many2many 1 retrogene
retro_mdom_124,
Nomascus leucogenys ENSNLEG00000011658 ortholog_many2many 1 retrogene
retro_nleu_36,
Otolemur garnettii ENSOGAG00000003641 ortholog_one2many 1 retrogene
retro_ogar_2757,
Procavia capensis ENSPCAG00000008662 ortholog_many2many 1 retrogene
retro_pcap_11,
Pongo abelii ENSPPYG00000002827 ortholog_many2many 3 retrogenes
retro_pabe_3109, retro_pabe_3213, retro_pabe_79,
Pan troglodytes ENSPTRG00000002711 ortholog_one2many 4 retrogenes
retro_ptro_3162, retro_ptro_3283, retro_ptro_3285, retro_ptro_3290,
Ictidomys tridecemlineatus ENSSTOG00000012843 ortholog_one2many 1 retrogene
retro_itri_737,
Tarsius syrichta ENSTSYG00000001578 ortholog_one2many 1 retrogene
retro_tsyr_313,
Tursiops truncatus ENSTTRG00000008145 ortholog_one2many 1 retrogene
retro_ttru_950,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_747 95.86 64.07
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Download FASTA sequences of all ENSCAFG00000016095 retrocopies