Parental gene: | ENSCJAG00000011633 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:36790539..36830755(+) |
>ENSCJAG00000011633
ACGTACGACCTGGGCGAAGCGCTTCTGCTGTCCCGGGCCGGGCCCGCTGCCCTGGGCGCGGCGGCTGCCGAATCGGCCGC
GCTGCTGGGCCGGGCCCGGGGACAGCCCGCCGCCGCCCCGCAGCAGGGGCTCGCATTGGCCGCCCGGCGCCACTACAGCG
AAGCGGTGGCCGACCGTGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTCGACCGCGGCGCCAGCATTGTG
GAGGACAAGCTGGTGGAGGATCTGAGGACCCGGGAGAGCGAGGAACAGAAGCGGAACCGGGTGCGCGGCATCCTGCGGAT
CATCAAGCCCTGCAACCATGTGCTGAGCCTCTCCTTCCCCATCCGGCGAGACGACGGCTCCTGGGAGGTCATCGAAGGCT
ACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGTGTAGATGAAGTG
AAAGCTTTGGCTTCTCTGATGACATACAAATGTGCAGTGGTTGATGTGCCGTTTGGAGGCGCTAAAGCTGGTGTTAAGAT
CAATCCCAAGAACTATACCGATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAACTGGCAAAGAAGGGCTTTA
TTGGTCCTGGCATTGATGTCCCTGCCCCAGACATGAGCACAGGTGAGCGGGAGATGTCCTGGATCGCTGATACCTATGCC
AGCACCATAGGCCACTATGATATTAATGCACATGCCTGTGTTACTGGTAAACCCATCAGTCAAGGGGGCATCCATGGACG
CATTTCTGCTACTGGCCGTGGTGTCTTCCATGGGATTGAAAACTTCATCAATGAAGCTTCTTACATGAGCATTTTAGGAA
TGACACCAGGATTTGGAGATAAAACGTTTGTTGTTCAGGGATTTGGTAATGTGGGCCTACACTCTATGAGGTATTTACAT
CGTTTTGGTGCTAAATGTATTGCTGTTGGTGAGTCTGATGGGAGTATATGGAATCCAGATGGTATTGACCCAAAGGAACT
GGAAGACTTCAAATTGCAACATGGGTCCATTCTGGGCTTCCCCAAGGCAAAGCCCTATGAAGGAAGCATCTTGGAAGCTG
ACTGTGACATACTGATCCCAGCTGCCAGTGAAAAGCAGTTGACCAAATCCAACGCACCCAGAGTCAAAGCCAAGATTATT
GCTGAAGGTGCCAACGGGCCAACAACTCCAGAAGCTGATAAGATCTTCCTGGAGAGAAACATTATGGTTATTCCAGATCT
CTACTTGAATGCTGGAGGAGTGACAGTATCATACTTTGAGTGGCTGAAGAATCTAAATCATGTCAGCTATGGCCGTTTAA
CCTTTAAATATGAAAGGGATTCTAACTACCACTTGCTCATGTCTGTTCAAGAGAGTTTAGAAAGAAAATTTGGAAAGCAT
GGTGGAACTATTCCCATTGTACCCACGGCAGAGTTCCAAGACAGGATATCGGGTGCATCTGAGAAAGACATCGTGCACTC
TGGCTTGGCATACACAATGGAGCGTTCTGCCAGGCAAATTATGCGCACAGCCATGAAATACAACCTGGGATTGGACCTGA
GAACAGCTGCCTACGTCAATGCCATTGAGAAAGTCTTCAAAGTGTACAATGAAGCTGGTGTGACCTTCACATAG
ACGTACGACCTGGGCGAAGCGCTTCTGCTGTCCCGGGCCGGGCCCGCTGCCCTGGGCGCGGCGGCTGCCGAATCGGCCGC
GCTGCTGGGCCGGGCCCGGGGACAGCCCGCCGCCGCCCCGCAGCAGGGGCTCGCATTGGCCGCCCGGCGCCACTACAGCG
AAGCGGTGGCCGACCGTGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTCGACCGCGGCGCCAGCATTGTG
GAGGACAAGCTGGTGGAGGATCTGAGGACCCGGGAGAGCGAGGAACAGAAGCGGAACCGGGTGCGCGGCATCCTGCGGAT
CATCAAGCCCTGCAACCATGTGCTGAGCCTCTCCTTCCCCATCCGGCGAGACGACGGCTCCTGGGAGGTCATCGAAGGCT
ACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGTGTAGATGAAGTG
AAAGCTTTGGCTTCTCTGATGACATACAAATGTGCAGTGGTTGATGTGCCGTTTGGAGGCGCTAAAGCTGGTGTTAAGAT
CAATCCCAAGAACTATACCGATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAACTGGCAAAGAAGGGCTTTA
TTGGTCCTGGCATTGATGTCCCTGCCCCAGACATGAGCACAGGTGAGCGGGAGATGTCCTGGATCGCTGATACCTATGCC
AGCACCATAGGCCACTATGATATTAATGCACATGCCTGTGTTACTGGTAAACCCATCAGTCAAGGGGGCATCCATGGACG
CATTTCTGCTACTGGCCGTGGTGTCTTCCATGGGATTGAAAACTTCATCAATGAAGCTTCTTACATGAGCATTTTAGGAA
TGACACCAGGATTTGGAGATAAAACGTTTGTTGTTCAGGGATTTGGTAATGTGGGCCTACACTCTATGAGGTATTTACAT
CGTTTTGGTGCTAAATGTATTGCTGTTGGTGAGTCTGATGGGAGTATATGGAATCCAGATGGTATTGACCCAAAGGAACT
GGAAGACTTCAAATTGCAACATGGGTCCATTCTGGGCTTCCCCAAGGCAAAGCCCTATGAAGGAAGCATCTTGGAAGCTG
ACTGTGACATACTGATCCCAGCTGCCAGTGAAAAGCAGTTGACCAAATCCAACGCACCCAGAGTCAAAGCCAAGATTATT
GCTGAAGGTGCCAACGGGCCAACAACTCCAGAAGCTGATAAGATCTTCCTGGAGAGAAACATTATGGTTATTCCAGATCT
CTACTTGAATGCTGGAGGAGTGACAGTATCATACTTTGAGTGGCTGAAGAATCTAAATCATGTCAGCTATGGCCGTTTAA
CCTTTAAATATGAAAGGGATTCTAACTACCACTTGCTCATGTCTGTTCAAGAGAGTTTAGAAAGAAAATTTGGAAAGCAT
GGTGGAACTATTCCCATTGTACCCACGGCAGAGTTCCAAGACAGGATATCGGGTGCATCTGAGAAAGACATCGTGCACTC
TGGCTTGGCATACACAATGGAGCGTTCTGCCAGGCAAATTATGCGCACAGCCATGAAATACAACCTGGGATTGGACCTGA
GAACAGCTGCCTACGTCAATGCCATTGAGAAAGTCTTCAAAGTGTACAATGAAGCTGGTGTGACCTTCACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 54 .26 RPM |
| SRP051959_skeletal_muscle | 28 .45 RPM |
| SRP051959_lymph_node | 49 .50 RPM |
| SRP051959_lung | 47 .74 RPM |
| SRP051959_liver | 398 .97 RPM |
| SRP051959_kidney | 138 .46 RPM |
| SRP051959_heart | 65 .69 RPM |
| SRP051959_colon | 42 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007540 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000016095 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000001101 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000009767 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000007371 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000019638 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000148672 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015770 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012059 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016526 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002756 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011658 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003641 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000008662 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002827 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000002711 | ortholog_one2one | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012843 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001578 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008145 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2830 | 82.32 | 63.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011633 retrocopies