Parental gene: | ENSECAG00000007371 |
| Aliases: | None |
| Description: | Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6V4L4] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 1:83464981..83501553(+) |
>ENSECAG00000007371
GCGAGGCGGCGGGCCGACCGCGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTCCGCGGCGCCAGCATCGT
GGAGGACAAGCTGGTGGAGGACCTCAAGACCCGGGAGAGCGAGGAGCAGAAGCGGAACCGGGTGCGCGGCATTCTGCGGA
TCATCAAAGCAAACCATGTGCTGAGCCTGTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAAGTCATCGAGGGCTAC
CGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGTGTAGACGAAGTGAA
GGCTTTGGCTTCTCTGATGACTTATAAGTGTGCAGTGGTTGATGTGCCATTTGGGGGTGCCAAAGCTGGTGTTAAGATCA
ATCCTAAAAACTATACCGATAATGAATTGGAAAAGATCACGAGGAGGTTTACCATGGAGCTGGCAAAGAAGGGCTTTATT
GGTCCTGGCATTGATGTGCCTGCCCCAGACATGAGCACGGGAGAGCGGGAGATGTCCTGGATTGCTGACACCTATGCTAG
CACCATAGGGCACTATGATATTAATGCCCACGCCTGTGTCACTGGGAAGCCCATCAGTCAGGGCGGAATCCATGGGCGGA
TCTCTGCCACTGGCCGGGGTCTTTTCCATGGGATCGAGAACTTCATCAATGAAGCTTCTTACATGAGCATTCTAGGAATG
ACGCCAGGGTTTGGAGATAAGACATTTGTCGTTCAGGGGTTTGGTAACGTGGGCCTGCACTCTATGAGATACTTACATCG
TTTCGGTGCTAAATGTATTGCTGTTGGTGAATCCGATGGGAGCATATGGAATCCAGATGGTATTGACCCAAAAGAACTGG
AAGACTTCAAATTGCAACATGGATCCATCCTGGGCTTCCCCAAGGCAAAGCCCTATGAAGGGAGCATCTTGGAGGCCGAC
TGTGACATCCTGATTCCTGCTGCCAGCGAGAAGCAGCTGACCAAGTCCAATGCACCAAGAGTCAAAGCCAAGATCATTGC
TGAAGGTGCCAATGGACCGACAACTCCGGAAGCCGATAAGATTTTCCTGGAGAGAAACATTATGGTTATTCCCGATCTCT
ACCTGAACGCCGGAGGGGTGACGGTGTCCTACTTTGAGTGGCTGAAGAATCTCAATCACGTCAGCTACGGCCGCCTGACC
TTCAAATACGAAAGGGATTCCAACTACCACTTGCTGATGTCTGTTCAAGAGAGTTTGGAAAGAAAATTTGGAAAGCACGG
TGGGACGATCCCCATTGTGCCCACGGCAGAGTTCCAAGACAGGATATCGGGTGCATCTGAGAAGGACATCGTGCACTCCG
GCTTAGCTTACACCATGGAGCGCTCTGCCCGGCAAATCATGCGTACGGCCATGAAGTACAACCTGGGGTTGGACCTGAGG
ACGGCCGCCTACGTCAACGCCATCGAGAAAGTCTTCAAGGTGTACAATGAAGCTGGTGTGACCTTCACATAG
GCGAGGCGGCGGGCCGACCGCGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTCCGCGGCGCCAGCATCGT
GGAGGACAAGCTGGTGGAGGACCTCAAGACCCGGGAGAGCGAGGAGCAGAAGCGGAACCGGGTGCGCGGCATTCTGCGGA
TCATCAAAGCAAACCATGTGCTGAGCCTGTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAAGTCATCGAGGGCTAC
CGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGTGTAGACGAAGTGAA
GGCTTTGGCTTCTCTGATGACTTATAAGTGTGCAGTGGTTGATGTGCCATTTGGGGGTGCCAAAGCTGGTGTTAAGATCA
ATCCTAAAAACTATACCGATAATGAATTGGAAAAGATCACGAGGAGGTTTACCATGGAGCTGGCAAAGAAGGGCTTTATT
GGTCCTGGCATTGATGTGCCTGCCCCAGACATGAGCACGGGAGAGCGGGAGATGTCCTGGATTGCTGACACCTATGCTAG
CACCATAGGGCACTATGATATTAATGCCCACGCCTGTGTCACTGGGAAGCCCATCAGTCAGGGCGGAATCCATGGGCGGA
TCTCTGCCACTGGCCGGGGTCTTTTCCATGGGATCGAGAACTTCATCAATGAAGCTTCTTACATGAGCATTCTAGGAATG
ACGCCAGGGTTTGGAGATAAGACATTTGTCGTTCAGGGGTTTGGTAACGTGGGCCTGCACTCTATGAGATACTTACATCG
TTTCGGTGCTAAATGTATTGCTGTTGGTGAATCCGATGGGAGCATATGGAATCCAGATGGTATTGACCCAAAAGAACTGG
AAGACTTCAAATTGCAACATGGATCCATCCTGGGCTTCCCCAAGGCAAAGCCCTATGAAGGGAGCATCTTGGAGGCCGAC
TGTGACATCCTGATTCCTGCTGCCAGCGAGAAGCAGCTGACCAAGTCCAATGCACCAAGAGTCAAAGCCAAGATCATTGC
TGAAGGTGCCAATGGACCGACAACTCCGGAAGCCGATAAGATTTTCCTGGAGAGAAACATTATGGTTATTCCCGATCTCT
ACCTGAACGCCGGAGGGGTGACGGTGTCCTACTTTGAGTGGCTGAAGAATCTCAATCACGTCAGCTACGGCCGCCTGACC
TTCAAATACGAAAGGGATTCCAACTACCACTTGCTGATGTCTGTTCAAGAGAGTTTGGAAAGAAAATTTGGAAAGCACGG
TGGGACGATCCCCATTGTGCCCACGGCAGAGTTCCAAGACAGGATATCGGGTGCATCTGAGAAGGACATCGTGCACTCCG
GCTTAGCTTACACCATGGAGCGCTCTGCCCGGCAAATCATGCGTACGGCCATGAAGTACAACCTGGGGTTGGACCTGAGG
ACGGCCGCCTACGTCAACGCCATCGAGAAAGTCTTCAAGGTGTACAATGAAGCTGGTGTGACCTTCACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 120 .24 RPM |
| SRP021940_embryo | 119 .42 RPM |
| SRP021940_cerebellum | 182 .23 RPM |
| SRP021940_testis | 19 .50 RPM |
| SRP021940_placental_villous | 83 .52 RPM |
| SRP021940_articular_cartilage | 78 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007540 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000016095 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000001101 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011633 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000009767 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019638 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000148672 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015770 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012059 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016526 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002756 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011658 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003641 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000008662 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002827 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000002711 | ortholog_one2one | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012843 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001578 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008145 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_886 | 74.09 | 54.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_919 | 96.49 | 90.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000007371 retrocopies