RetrogeneDB ID: | retro_tsyr_313 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_790:105937..106424(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTSYG00000001578 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 51.81 % |
Parental protein coverage: | 54.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | GMTPGFGDKTFVVQ-GFGNVGLHSMRYLHRFGAKCVGVGESDGSIWNPDGIDPKELEDFKLQHGSILGFP |
G..P..G.KT..V...FGN..LH.MRYL..F...CVG.GE.D..IWN.D....KELE..KL..G.I..FP | |
Retrocopy | GIAPHVGNKTVIVW<AFGNIALHTMRYLYHFEVRCVGIGEIDDNIWNSDSVFSKELEESKL*TGTITVFP |
Parental | KAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNA |
....Y....L....DI......EKQLTK.NA...K.KIIAEG.NG..TP...KIFL.RN..VIP.LYLNA | |
Retrocopy | TVRSYNRNTLKENYDI*TFVSGEKQLTKCNAFKIKTKIIAEGGNGLLTPRI-KIFLSRNSPVIPALYLNA |
Parental | GGVTVSYFEWL-KNLNHVSYGRLTFK |
.GVT....E.L.KNLN..SY..L..K | |
Retrocopy | RGVTILFKEFL<KNLNFMSYVYLNLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |