Parental gene: | SCO1, ENSCHOG00000007572 |
| Aliases: | None |
| Description: | SCO1 cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:10603] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_6398:6508..20198(-) |
>ENSCHOG00000007572
ATGGCGGGGCTACTAGTGGTCCTTGGCCGAGTCGTGCGACTTCCGGATGGCCGCCTTTGGCGTTTCTTATGTCGCGGAGT
CGAGCGTTGGGGTCCCGCAGAGGCGACCGCGAGAGCCTCCCCGAGGCAGCTCTGCGTGCGACGAGAGGAGGCGTGGCGGG
GCTCGGGGCTCGCGGGCAGCTGCCTGGGAAGCCGGGCCCTCGGCACTGCCATGCCGCCGCCCCCGGGGTCGTCAGGGCCG
GAATCGAAGGGCCTCAGAGACCCCACGCGCCCCTCGCAGCCCGGGCCCGTTTCTTGGAAGTCCTTAGCACTCACATTTGC
TGTTGGAGGAGCTTTACTGGCTGGAATGAAATACTTCAAGAAAGAAAAGGCAGAAAAGCTGGAGAAGGAACGGCAGCGAA
GTTTAGGAAAGCCTTTACTTGGGGGACCGTTTTCCCTCACAACTCATATTGGAGAACCTAAAACTGACAAGGACTACCTG
GGCCAGTGGGTACTGATTTATTTTGGTTTCACCCATTGCCCTGATATCTGTCCAGAAGAACTAGAAAAAATGATTCAAGT
CGTGGATGAAATAGATAGTATTCCATCACTACCAAATTTAACTCCGCTTTTCATCACTATTGACCCAGAGAGGGACACAA
AAGAAGCCATTGCAACTTATGTGAAAGAATTTTCTCCCAAGCTGATTGGCTTGACTGGGACAAAAGAAGAGATTGATCAA
GTGGCCCGGGCATACAGAGTATATTACAGCCCAGGACCCAAGGATGAGGACGAGGACTACATAGTGGATCATACAATAAT
AATGTACTTGATTGGACCAGATGGTGAGTTTCTAGATTATTTTGGCCAGAACAAGAAGAATGCAGAAATAGCCGGTGCGA
TTGCTGCACACATGAGGGAGCACCGGAAGAAGAGTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000325 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000021780 | ortholog_one2one | 1 retrogene | |
| Danio rerio | ENSDARG00000067593 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000025151 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000011060 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003959 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000133028 | ortholog_one2one | 1 retrogene | |
| Gallus gallus | ENSGALG00000013382 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000005056 | ortholog_one2one | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000009584 | ortholog_one2one | 1 retrogene | |
| Oryzias latipes | ENSORLG00000001047 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_68 | 66.81 | 73.77 | Please wait, loading  |
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| 2. | retro_chof_447 | 88.72 | 63.61 | Please wait, loading |
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| 3. | retro_chof_516 | 85.65 | 72.79 | Please wait, loading |
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| 4. | retro_chof_827 | 83.17 | 100.00 | Please wait, loading |
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| 5. | retro_chof_2118 | 78.76 | 100.00 | Please wait, loading |
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| 6. | retro_chof_2547 | 92.90 | 55.41 | Please wait, loading |
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| 7. | retro_chof_2648 | 89.61 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCHOG00000007572 retrocopies