Parental gene:

SCO1, ENSORLG00000001047

Aliases:None
Description:None
Organism:Medaka (Oryzias latipes)
Coordinates:8:1974583..1977955(-)


>ENSORLG00000001047
ATGAGCGCGTTTTACCAAAGCCTGCGGGCGCTAAACCCGCACAGGTTCAGCGGCAGCTTCACGCAAATTTTTATCCGTGG
AGCAACGGGGCTTAGACCAGCGCTGTGCCCGCAGGGAGTCCACTGCTGCCCGGTGAACCAGAGAGCCCTGCAGTGGAGGG
CCCTCTCCTCGCTGCCCCCTCCCCCTTCATCCGGGGAGCAGCCTAAAAAGTCCGGGCCCGTCACCTGGAGGTCTTTGGCG
GTGACGTTCGCGATCGGCGGTGCGTTGCTGGGAGTGATGAAATACTTCAAGAAAGAGAAGGAAGAACTGCTGGAGAAGGA
GCGCAACAAATCCATCGGGAGGCCGGCGCTGGGGGGGCCCTTTTCATTGGTCGACCACAACAACAAACCCACCAAGAGCC
AGGACTTCCTGGGCCAGTGGGTCCTCCTGTACTTCGGCTTCACGCACTGCCCCGACATCTGCCCCGATGAGATAGAGAAG
ATGATCGAAGTGGTGGATGAAATCGATAAAATACAGTCTCTTCCAAACCTGACCCCCCTCCTCATCACCATCGACCCGGA
GCGGGACACTCCAGAGGCCATGGCTGCTTACGTCAAAGAATTTTCGCCGAAGCTGATCGGCCTGACGGGATCGACCGCTC
AGATCGAGGAGGTTTCCCGCGCCTACAGAGTTTACTACAGCCAGGGGCCGAAGGACGAGGACAACGACTACATCGTGGAT
CACACCATCATCATGTATCTCATCGGACCGGACGGAGAGTTCGTGGAGTATTTTGGACAGAACAAAAGAGGCGTGGAGAT
CTCCAACTCCATAGCAGCTCACATGAGGAAGCACAGGAAGAAGTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000325 ortholog_one2one 1 retrogene
retro_amel_67,
Bos taurus ENSBTAG00000021780 ortholog_one2one 1 retrogene
retro_btau_393,
Choloepus hoffmanni ENSCHOG00000007572 ortholog_one2one 7 retrogenes
retro_chof_2118, retro_chof_2547, retro_chof_2648, retro_chof_447, retro_chof_516, retro_chof_68, retro_chof_827,
Danio rerio ENSDARG00000067593 ortholog_one2one 1 retrogene
retro_drer_14,
Equus caballus ENSECAG00000025151 ortholog_one2one 1 retrogene
retro_ecab_50,
Erinaceus europaeus ENSEEUG00000011060 ortholog_one2one 1 retrogene
retro_eeur_4,
Felis catus ENSFCAG00000003959 ortholog_one2one 1 retrogene
retro_fcat_36,
Homo sapiens ENSG00000133028 ortholog_one2one 1 retrogene
retro_hsap_1112,
Gallus gallus ENSGALG00000013382 ortholog_one2one 1 retrogene
retro_ggal_14,
Loxodonta africana ENSLAFG00000005056 ortholog_one2one 1 retrogene
retro_lafr_567,
Oreochromis niloticus ENSONIG00000009584 ortholog_one2one 1 retrogene
retro_onil_50,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_olat_14 50.74 71.89
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Download FASTA sequences of all ENSORLG00000001047 retrocopies