Parental gene:

AP4S1, ENSCJAG00000005786

Aliases:None
Description:adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575]
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:55235845..55298092(+)


>ENSCJAG00000005786
ATGATAAAATTTTTCCTCATGGTGAATAAACAAGGGCAGACTCGACTTTCTAAGTACTATGAACATGTGGATATTAATAA
GCGTACGTTTCTGGAAACAGAAGTCATAAAGAGCTGTCTCTCTCGATCCAATGAACAATGCTCTTTCATTGAATATAAGG
ATTTTAAGTTGATATATCGGCAGTATGCAGCTCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAACGAGATGGCTATT
TATGAATTCATTCATAACTTTGTGGAAGTTTTAGATGAATATTTCAGCCGAGTGAGTGAATTAGATATAATGTTTAATTT
AGATAAAGTACACATCATTTTGGATGAGATGGTGTTAAATGGCTGCATTGTGGAAACTAACAGGGCAAGAATTCTTGCCC
CTCTACTAATTCTTGATAAGATGTCAGAAAGCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .37 RPM
SRP051959_skeletal_muscle 13 .71 RPM
SRP051959_lymph_node 4 .61 RPM
SRP051959_lung 4 .49 RPM
SRP051959_liver 2 .25 RPM
SRP051959_kidney 4 .17 RPM
SRP051959_heart 5 .88 RPM
SRP051959_colon 2 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004393 within_species_paralog 1 retrogene
retro_cjac_2312,
Callithrix jacchus ENSCJAG00000012352 within_species_paralog 2 retrogenes
retro_cjac_3187, retro_cjac_3903,
Macaca mulatta ENSMMUG00000003123 possible_ortholog 1 retrogene
retro_mmul_17,
Monodelphis domestica ENSMODG00000017579 ortholog_one2one 1 retrogene
retro_mdom_1774,
Ornithorhynchus anatinus ENSOANG00000014031 ortholog_one2one 1 retrogene
retro_oana_60,
Pongo abelii ENSPPYG00000005723 possible_ortholog 1 retrogene
retro_pabe_2889,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2742 98.61 100.00
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Download FASTA sequences of all ENSCJAG00000005786 retrocopies