Parental gene:

AP4S1, ENSPPYG00000005723

Aliases:None
Description:adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575]
Organism:Orangutan (Pongo abelii)
Coordinates:14:30644939..30706624(+)


>ENSPPYG00000005723
ATGATAAAATTTTTCCTCATGGTGAATAAACAAGGGCAGACTCGACTTTCTAAGTACTATGAACATGTGGATATTAATAA
GCGTACACTTCTGGAAACAGAAGTCATAAAGAGCTGTCTCTCTCGATCCAATGAACAATGCTCTTTCATTGAATATAAGG
ATTTTAAGCTGATATATCGGCAGTATGCAGCTCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAACGAGATGGCTATT
TATGAATTCATTCATAACTTTGTGGAAGTTTTGGATGAGTATTTCAGCCGAGTGAGTGAATTAGATGTATCCTTTTTCAA
TACTGTTTTCCATGGTACTTGGCAAACGCACTCTGGTCCTTATCAGGAACCAATTGATGAACTTCCCAAAATATGCTCAG
CCCTGGAGCCCCAGCAGGCTTGCTTTTCTCTAGATAGTTCATCATTCAAAGGAGCTGCCTCCACCACCCCCATCTACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .43 RPM
SRP007412_cerebellum 1 .82 RPM
SRP007412_heart 0 .78 RPM
SRP007412_kidney 0 .40 RPM
SRP007412_liver 0 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013301 ortholog_one2many 4 retrogenes
retro_chof_2345, retro_chof_2677, retro_chof_393, retro_chof_820,
Callithrix jacchus ENSCJAG00000005786 possible_ortholog 1 retrogene
retro_cjac_2742,
Dipodomys ordii ENSDORG00000009468 ortholog_one2many 1 retrogene
retro_dord_595,
Erinaceus europaeus ENSEEUG00000013009 ortholog_one2many 1 retrogene
retro_eeur_301,
Homo sapiens ENSG00000100478 ortholog_one2one 1 retrogene
retro_hsap_3496,
Gorilla gorilla ENSGGOG00000003198 ortholog_one2one 1 retrogene
retro_ggor_2363,
Myotis lucifugus ENSMLUG00000011671 possible_ortholog 1 retrogene
retro_mluc_1841,
Macaca mulatta ENSMMUG00000003123 possible_ortholog 1 retrogene
retro_mmul_17,
Monodelphis domestica ENSMODG00000017579 ortholog_one2many 1 retrogene
retro_mdom_1774,
Nomascus leucogenys ENSNLEG00000015901 ortholog_one2one 1 retrogene
retro_nleu_788,
Ornithorhynchus anatinus ENSOANG00000014031 ortholog_one2many 1 retrogene
retro_oana_60,
Pan troglodytes ENSPTRG00000006239 ortholog_one2one 1 retrogene
retro_ptro_2368,
Pteropus vampyrus ENSPVAG00000017161 ortholog_one2many 1 retrogene
retro_pvam_1455,
Rattus norvegicus ENSRNOG00000005765 possible_ortholog 1 retrogene
retro_rnor_2200,
Ictidomys tridecemlineatus ENSSTOG00000010759 ortholog_one2many 1 retrogene
retro_itri_1050,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2889 91.51 66.04
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Download FASTA sequences of all ENSPPYG00000005723 retrocopies