Parental gene:

UBE2V2, ENSCJAG00000032182

Aliases:None
Description:ubiquitin-conjugating enzyme E2 variant 2 [Source:HGNC Symbol;Acc:12495]
Organism:Marmoset (Callithrix jacchus)
Coordinates:16:881863..929472(+)


>ENSCJAG00000032182
ATGGCGGTCTCCACAGGAGTTAAAGTTCCCCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAAAAGGAGTAGG
CGATGGTACGGTTAGCTGGGGCCTTGAAGATGATGAAGATATGACACTTACAAGGTGGACAGGCATGATTATTGGGCCAC
CAAGGACAAATTATGAAAACAGAATATATAGCCTGAAAGTAGAATGTGGACCTAAATACCCTGAAGCTCCTCCGTCAGTT
AGATTTGTAACAAAAATTAATATGAATGGAGTAAATAATTCCAGTGGGATGGTGGATGCCCGGAGCATACCAGTGTTAGC
AAAATGGCAAAATTCATATAGCATTAAAGTTGTACTTCAAGAGCTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGC
TTCCACAGCCACCAGAAGGACAAACGTACAACAATTAA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .04 RPM
SRP051959_skeletal_muscle 10 .31 RPM
SRP051959_lymph_node 6 .39 RPM
SRP051959_lung 8 .90 RPM
SRP051959_liver 8 .27 RPM
SRP051959_kidney 9 .01 RPM
SRP051959_heart 9 .89 RPM
SRP051959_colon 8 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000036984 within_species_paralog 10 retrogenes
retro_cjac_1076, retro_cjac_1952, retro_cjac_2810, retro_cjac_2865, retro_cjac_3081, retro_cjac_3140, retro_cjac_3258, retro_cjac_4089, retro_cjac_462, retro_cjac_974,
Loxodonta africana ENSLAFG00000017749 ortholog_one2one 1 retrogene
retro_lafr_1168,
Macropus eugenii ENSMEUG00000016581 ortholog_one2one 1 retrogene
retro_meug_2093,
Monodelphis domestica ENSMODG00000010191 ortholog_one2many 10 retrogenes
retro_mdom_1065, retro_mdom_1151, retro_mdom_1167, retro_mdom_1435, retro_mdom_1660, retro_mdom_173, retro_mdom_1979, retro_mdom_736, retro_mdom_786, retro_mdom_979,
Mus musculus ENSMUSG00000022674 possible_ortholog 4 retrogenes
retro_mmus_1385, retro_mmus_189, retro_mmus_2048, retro_mmus_2770,
Oryctolagus cuniculus ENSOCUG00000006933 possible_ortholog 1 retrogene
retro_ocun_5,
Procavia capensis ENSPCAG00000000293 ortholog_one2one 1 retrogene
retro_pcap_138,
Sus scrofa ENSSSCG00000022190 ortholog_one2one 1 retrogene
retro_sscr_524,
Tursiops truncatus ENSTTRG00000008325 ortholog_one2one 1 retrogene
retro_ttru_1623,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_814 94.17 71.03
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Download FASTA sequences of all ENSCJAG00000032182 retrocopies