Parental gene:

UBE2V2, ENSSSCG00000022190

Aliases:None
Description:ubiquitin-conjugating enzyme E2 variant 2 [Source:HGNC Symbol;Acc:12495]
Organism:Pig (Sus scrofa)
Coordinates:GL896310.1:30065..46327(+)


>ENSSSCG00000022190
GGGGTCTCTAGAGGAGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAAAAGGAGTAGGCGA
TGGTACGGTTAGCTGGGGCCTTGAAGATGACGAAGACATGACACTTACAAGGTGGACAGGCATGATTATTGGGCCACCAA
GGACAAATTATGAAAACAGAATATATAGCCTGAAAATAGAATGCGGACCTAAATACCCAGAAGCTCCTCCATCAGTTAGA
TTTGTAACCAAAATTAATATGAATGGAATAAATAATTCCAGTGGAATGGTGGATGCACGGAGCATACCAGTGTTAGCAAA
ATGGCAAAATTCATATAGCATTAAAGTTGTACTTCAGGAGCTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGCTGC
CACAGCCACCAGAAGGACAAACATACAACAATTAA

Library Parental gene expression (RPM)
SRP014902_placenta 15 .13 RPM
SRP014902_testis 25 .32 RPM
SRP018856_adipose 37 .17 RPM
SRP018288_kidney 44 .33 RPM
SRP018288_lung 55 .80 RPM
SRP018288_liver 29 .58 RPM
SRP018288_heart 25 .12 RPM
SRP035408_liver 27 .42 RPM
SRP035408_brain 130 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000032182 ortholog_one2one 1 retrogene
retro_cjac_814,
Loxodonta africana ENSLAFG00000017749 ortholog_one2one 1 retrogene
retro_lafr_1168,
Macropus eugenii ENSMEUG00000016581 ortholog_one2one 1 retrogene
retro_meug_2093,
Monodelphis domestica ENSMODG00000010191 ortholog_one2many 10 retrogenes
retro_mdom_1065, retro_mdom_1151, retro_mdom_1167, retro_mdom_1435, retro_mdom_1660, retro_mdom_173, retro_mdom_1979, retro_mdom_736, retro_mdom_786, retro_mdom_979,
Mus musculus ENSMUSG00000022674 possible_ortholog 4 retrogenes
retro_mmus_1385, retro_mmus_189, retro_mmus_2048, retro_mmus_2770,
Oryctolagus cuniculus ENSOCUG00000006933 possible_ortholog 1 retrogene
retro_ocun_5,
Procavia capensis ENSPCAG00000000293 ortholog_one2one 1 retrogene
retro_pcap_138,
Sus scrofa ENSSSCG00000030632 within_species_paralog 1 retrogene
retro_sscr_431,
Tursiops truncatus ENSTTRG00000008325 ortholog_one2one 1 retrogene
retro_ttru_1623,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_524 53.77 70.83
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Download FASTA sequences of all ENSSSCG00000022190 retrocopies