Parental gene:

RHOA, ENSCPOG00000014073

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_8:24438645..24447066(-)


>ENSCPOG00000014073
ATGGCTGCCATCCGAAAGAAACTGGTAATTGTTGGTGATGGAGCTTGTGGTAAGACATGCTTGCTCATAGTCTTCAGCAA
GGACCAGTTCCCAGAAGTATATGTTCCCACAGTGTTTGAGAACTATGTGGCAGATATTGAAGTGGATGGGAAACAGGTAG
AGTTGGCTTTGTGGGACACGGCTGGACAGGAAGATTATGATCGCCTGAGGCCTCTCTCTTACCCAGATACTGATGTTATA
CTCATGTGTTTCTCCATTGACAGCCCTGATAGTTTAGAAAACATCCCAGAAAAATGGACCCCAGAAGTGAAGCATTTCTG
TCCCAACGTACCCATTATCCTGGTTGGGAACAAGAAGGATCTTCGGAATGATGAGCACACAAGGCGGGAGTTAGCCAAGA
TGAAACAGGAGCCAGTAAAACCTGAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCCTTTGGATACATGGAGTGTTCA
GCAAAGACCAAAGATGGAGTGAGAGAAGTTTTTGAAATGGCCACGAGAGCTGCTCTGCAAGCCAGGCGTGGGAAGAAAAA
ATCTGGGTGCCTTGTCTTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 65 .91 RPM
SRP017611_kidney 143 .84 RPM
SRP017611_liver 134 .50 RPM
SRP040447_lung 184 .19 RPM
SRP040447_skeletal_muscle 48 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008297 ortholog_one2one 1 retrogene
retro_acar_41,
Anas platyrhynchos ENSAPLG00000014687 ortholog_one2one 1 retrogene
retro_apla_10,
Canis familiaris ENSCAFG00000023066 possible_ortholog 2 retrogenes
retro_cfam_1652, retro_cfam_186,
Callithrix jacchus ENSCJAG00000003904 possible_ortholog 3 retrogenes
retro_cjac_1306, retro_cjac_2010, retro_cjac_411,
Dipodomys ordii ENSDORG00000003382 possible_ortholog 3 retrogenes
retro_dord_1, retro_dord_18, retro_dord_538,
Homo sapiens ENSG00000067560 ortholog_one2one 2 retrogenes
retro_hsap_108, retro_hsap_3632,
Gasterosteus aculeatus ENSGACG00000005670 possible_ortholog 1 retrogene
retro_gacu_9,
Gallus gallus ENSGALG00000003806 ortholog_one2one 1 retrogene
retro_ggal_5,
Gadus morhua ENSGMOG00000008188 possible_ortholog 1 retrogene
retro_gmor_18,
Latimeria chalumnae ENSLACG00000016941 ortholog_one2one 1 retrogene
retro_lcha_15,
Meleagris gallopavo ENSMGAG00000002280 ortholog_one2one 1 retrogene
retro_mgal_2,
Macaca mulatta ENSMMUG00000012962 possible_ortholog 1 retrogene
retro_mmul_977,
Monodelphis domestica ENSMODG00000012981 ortholog_one2one 2 retrogenes
retro_mdom_19, retro_mdom_294,
Mustela putorius furo ENSMPUG00000013840 ortholog_one2one 5 retrogenes
retro_mputfur_1015, retro_mputfur_140, retro_mputfur_1541, retro_mputfur_1588, retro_mputfur_650,
Mus musculus ENSMUSG00000007815 ortholog_one2one 9 retrogenes
retro_mmus_178, retro_mmus_191, retro_mmus_2041, retro_mmus_2507, retro_mmus_3728, retro_mmus_3729, retro_mmus_3964, retro_mmus_3965, retro_mmus_3966,
Ornithorhynchus anatinus ENSOANG00000013807 ortholog_one2one 1 retrogene
retro_oana_7,
Oreochromis niloticus ENSONIG00000018884 possible_ortholog 1 retrogene
retro_onil_32,
Ochotona princeps ENSOPRG00000009638 ortholog_one2one 1 retrogene
retro_opri_590,
Pelodiscus sinensis ENSPSIG00000015328 ortholog_one2one 1 retrogene
retro_psin_7,
Rattus norvegicus ENSRNOG00000050519 ortholog_one2one 3 retrogenes
retro_rnor_127, retro_rnor_2899, retro_rnor_408,
Ictidomys tridecemlineatus ENSSTOG00000004561 possible_ortholog 2 retrogenes
retro_itri_39, retro_itri_96,
Takifugu rubripes ENSTRUG00000011944 possible_ortholog 1 retrogene
retro_trub_19,
Tursiops truncatus ENSTTRG00000017370 ortholog_one2one 2 retrogenes
retro_ttru_27, retro_ttru_339,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_514 83.72 89.12
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Download FASTA sequences of all ENSCPOG00000014073 retrocopies