Parental gene:

ENSCPOG00000014693

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_10:32945246..32948116(+)


>ENSCPOG00000014693
CAGGGCCGAGTTCGCACCAAGACAGTGAAGAAGGCGGCCCGAGTCATCATTGAGAAGTACTACACTCGCCTCGGTAATGA
CTTCCATACTAACAAGCGCGTGTGCGAGGAGATTGCCATCATCCCCAGCAAGAAGCTCCGCAACAAGATAGCCGGCTATG
TGACACATCTGATGAAGCGGATTCAGAGAGGCCCAGTACGGGGTATTTCCATCAAGCTGCAGGAGGAGGAGAGAGAAAGG
AGAGATAATTATGTCCCTGAGGTTTCAGCCTTGGATCAGGAAATCATTGAAGTAGATCCTGACACTAAGGAAATGCTGAA
GCTTTTGGACTTCGGCAGCCTCTCCAACCTGCAGGTCACGCAGCCTACTGTCGGGATGAATTTCAAAACGCCACGTGGAG
CTGTTTGA

Library Parental gene expression (RPM)
SRP017611_brain 73 .28 RPM
SRP017611_kidney 114 .42 RPM
SRP017611_liver 90 .67 RPM
SRP040447_lung 165 .83 RPM
SRP040447_skeletal_muscle 132 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012225 ortholog_one2one 4 retrogenes
retro_acar_128, retro_acar_154, retro_acar_177, retro_acar_81,
Ailuropoda melanoleuca ENSAMEG00000014122 ortholog_one2one 5 retrogenes
retro_amel_1571, retro_amel_1662, retro_amel_179, retro_amel_431, retro_amel_492,
Bos taurus ENSBTAG00000000622 ortholog_one2one 4 retrogenes
retro_btau_1014, retro_btau_568, retro_btau_731, retro_btau_884,
Canis familiaris ENSCAFG00000013053 possible_ortholog 9 retrogenes
retro_cfam_1032, retro_cfam_1234, retro_cfam_1680, retro_cfam_1707, retro_cfam_217, retro_cfam_240, retro_cfam_307, retro_cfam_491, retro_cfam_82,
Dasypus novemcinctus ENSDNOG00000012633 ortholog_one2one 6 retrogenes
retro_dnov_1183, retro_dnov_1296, retro_dnov_2140, retro_dnov_2636, retro_dnov_416, retro_dnov_673,
Equus caballus ENSECAG00000024902 ortholog_one2one 1 retrogene
retro_ecab_92,
Felis catus ENSFCAG00000002358 ortholog_one2one 7 retrogenes
retro_fcat_1060, retro_fcat_1354, retro_fcat_1419, retro_fcat_1549, retro_fcat_288, retro_fcat_436, retro_fcat_710,
Homo sapiens ENSG00000182774 possible_ortholog 11 retrogenes
retro_hsap_1516, retro_hsap_1743, retro_hsap_2150, retro_hsap_2702, retro_hsap_3172, retro_hsap_3477, retro_hsap_3570, retro_hsap_3588, retro_hsap_3719, retro_hsap_464, retro_hsap_925,
Homo sapiens ENSG00000184779 possible_ortholog 5 retrogenes
retro_hsap_2559, retro_hsap_2854, retro_hsap_3233, retro_hsap_3909, retro_hsap_4110,
Loxodonta africana ENSLAFG00000031717 ortholog_one2one 5 retrogenes
retro_lafr_1105, retro_lafr_1204, retro_lafr_359, retro_lafr_573, retro_lafr_634,
Myotis lucifugus ENSMLUG00000022830 possible_ortholog 3 retrogenes
retro_mluc_1202, retro_mluc_1347, retro_mluc_1949,
Macaca mulatta ENSMMUG00000011327 possible_ortholog 6 retrogenes
retro_mmul_116, retro_mmul_194, retro_mmul_200, retro_mmul_266, retro_mmul_67, retro_mmul_99,
Monodelphis domestica ENSMODG00000002011 ortholog_one2one 9 retrogenes
retro_mdom_1482, retro_mdom_1923, retro_mdom_1928, retro_mdom_330, retro_mdom_342, retro_mdom_422, retro_mdom_425, retro_mdom_645, retro_mdom_762,
Mustela putorius furo ENSMPUG00000015571 ortholog_one2one 5 retrogenes
retro_mputfur_218, retro_mputfur_388, retro_mputfur_476, retro_mputfur_57, retro_mputfur_681,
Oryctolagus cuniculus ENSOCUG00000006370 ortholog_one2one 1 retrogene
retro_ocun_90,
Pongo abelii ENSPPYG00000006888 possible_ortholog 3 retrogenes
retro_pabe_108, retro_pabe_194, retro_pabe_72,
Rattus norvegicus ENSRNOG00000019106 ortholog_one2many 6 retrogenes
retro_rnor_19, retro_rnor_23, retro_rnor_276, retro_rnor_285, retro_rnor_289, retro_rnor_84,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_246 61.94 93.33
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2. retro_cpor_440 92.59 99.26
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3. retro_cpor_1472 75.00 91.11
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Download FASTA sequences of all ENSCPOG00000014693 retrocopies