Parental gene:

SMIM20, ENSDNOG00000004966

Aliases:None
Description:small integral membrane protein 20 [Source:HGNC Symbol;Acc:37260]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_964:291597..305231(+)


>ENSDNOG00000004966
CCCGGAAGCGAAAGCTGCCCCTCCTCTTCCCAGCCGGGTCACGGAATCTCGGATTCCGGGAGGGAAGGGTGCCTAGCGGG
TCAGGGGTGCCCCCCCGGCGCCATGTCCCGCAACCTGCGCACCGCGCTCGTTTTCGGCGGCTTTATCTCCCTGCTCGGCG
CCGTCTTCTATCCCATCTACTTCCGGCCCCTCCTGCGGCTGGAAGAGTACCAGAAGGAACAAGCCATAAATCGAGCTGGT
ATTGTTCAAGCAGATGTGCAGCCACCAGGGTTAAAAGTATGGTCTGATCCATTTGGCAGGAAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 19 .06 RPM
SRP012922_cerebellum 12 .65 RPM
SRP012922_heart 34 .80 RPM
SRP012922_kidney 33 .95 RPM
SRP012922_liver 19 .51 RPM
SRP012922_lung 16 .95 RPM
SRP012922_quadricep_muscle 37 .91 RPM
SRP012922_spleen 22 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003897 ortholog_one2many 1 retrogene
retro_btau_95,
Macropus eugenii ENSMEUG00000002680 ortholog_one2one 1 retrogene
retro_meug_147,
Microcebus murinus ENSMICG00000017222 ortholog_one2one 1 retrogene
retro_mmur_868,
Macaca mulatta ENSMMUG00000006680 ortholog_one2many 1 retrogene
retro_mmul_179,
Nomascus leucogenys ENSNLEG00000016894 ortholog_one2one 1 retrogene
retro_nleu_216,
Ictidomys tridecemlineatus ENSSTOG00000004810 ortholog_one2one 1 retrogene
retro_itri_699,
Tupaia belangeri ENSTBEG00000015052 ortholog_one2one 2 retrogenes
retro_tbel_1277, retro_tbel_4083,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1474 75.31 79.21
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2. retro_dnov_1529 66.02 97.03
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Download FASTA sequences of all ENSDNOG00000004966 retrocopies