Parental gene: | SMIM20, ENSDNOG00000004966 |
| Aliases: | None |
| Description: | small integral membrane protein 20 [Source:HGNC Symbol;Acc:37260] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_964:291597..305231(+) |
>ENSDNOG00000004966
CCCGGAAGCGAAAGCTGCCCCTCCTCTTCCCAGCCGGGTCACGGAATCTCGGATTCCGGGAGGGAAGGGTGCCTAGCGGG
TCAGGGGTGCCCCCCCGGCGCCATGTCCCGCAACCTGCGCACCGCGCTCGTTTTCGGCGGCTTTATCTCCCTGCTCGGCG
CCGTCTTCTATCCCATCTACTTCCGGCCCCTCCTGCGGCTGGAAGAGTACCAGAAGGAACAAGCCATAAATCGAGCTGGT
ATTGTTCAAGCAGATGTGCAGCCACCAGGGTTAAAAGTATGGTCTGATCCATTTGGCAGGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 19 .06 RPM |
| SRP012922_cerebellum | 12 .65 RPM |
| SRP012922_heart | 34 .80 RPM |
| SRP012922_kidney | 33 .95 RPM |
| SRP012922_liver | 19 .51 RPM |
| SRP012922_lung | 16 .95 RPM |
| SRP012922_quadricep_muscle | 37 .91 RPM |
| SRP012922_spleen | 22 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003897 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002680 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000017222 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006680 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016894 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004810 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015052 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1474 | 75.31 | 79.21 | Please wait, loading  |
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| 2. | retro_dnov_1529 | 66.02 | 97.03 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000004966 retrocopies