Parental gene: | CKS2, ENSDNOG00000009427 |
| Aliases: | None |
| Description: | CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2543:448..6652(+) |
>ENSDNOG00000009427
ATGGCTCATAAGCAGATCTACTATTCGGACAAGTACTTCGACGAGCATTACGAGTACCGGCATGTCATGTTACCCAGAGA
ACTTTCTAAACAAGTACCCAAAACTCATCTAATGTCTGAAGAAGAGTGGAGGAGACTTGGTGTCCAGCAGAGTCTTGGCT
GGGTTCATTACATGATTCATGAGCCAGAACCACATATTCTTCTCTTTAGACGACCTCTTCCAAAAGATCAACAAAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 12 .64 RPM |
| SRP012922_cerebellum | 0 .14 RPM |
| SRP012922_heart | 0 .23 RPM |
| SRP012922_kidney | 0 .00 RPM |
| SRP012922_liver | 0 .62 RPM |
| SRP012922_lung | 1 .22 RPM |
| SRP012922_quadricep_muscle | 0 .69 RPM |
| SRP012922_spleen | 30 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002194 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007792 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004384 | ortholog_one2one | 7 retrogenes | |
| Echinops telfairi | ENSETEG00000001260 | ortholog_one2one | 10 retrogenes | |
| Felis catus | ENSFCAG00000022286 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000123975 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000062248 | ortholog_one2one | 4 retrogenes | |
| Ochotona princeps | ENSOPRG00000007583 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000025843 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021093 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014130 | ortholog_one2many | 5 retrogenes | |
| Sorex araneus | ENSSARG00000002443 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000048 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_195 | 86.08 | 100.00 | Please wait, loading  |
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| 2. | retro_dnov_585 | 78.67 | 94.94 | Please wait, loading |
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| 3. | retro_dnov_755 | 80.00 | 100.00 | Please wait, loading |
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| 4. | retro_dnov_1200 | 80.00 | 100.00 | Please wait, loading |
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| 5. | retro_dnov_1527 | 83.54 | 100.00 | Please wait, loading |
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| 6. | retro_dnov_1984 | 78.48 | 100.00 | Please wait, loading |
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| 7. | retro_dnov_2530 | 91.14 | 100.00 | Please wait, loading |
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| 8. | retro_dnov_2532 | 79.01 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000009427 retrocopies