Parental gene:

CKS2, ENSSTOG00000000048

Aliases:None
Description:CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393590.1:257564..262556(+)


>ENSSTOG00000000048
ATGGCCCATAAGCAGATCTACTACTCTGACAAGTACTTCGACGAGCACTATGAGTACCGGCATGTCATGTTACCCAGAGA
ACTTTCCAAACAAGTACCCAAAACTCATCTAATGTCTGAAGAGGAGTGGAGGAGACTTGGTGTCCAACAGAGTCTAGGCT
GGGTTCATTACATGATTCATGAGCCAGAACCCCATATTCTTCTCTTTAGACGACCTCTTCCAAAAGAGCAACAAAAATGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007792 ortholog_one2many 1 retrogene
retro_cjac_261,
Dasypus novemcinctus ENSDNOG00000009427 ortholog_one2one 8 retrogenes
retro_dnov_1200, retro_dnov_1527, retro_dnov_195, retro_dnov_1984, retro_dnov_2530, retro_dnov_2532, retro_dnov_585, retro_dnov_755,
Erinaceus europaeus ENSEEUG00000004384 ortholog_one2one 7 retrogenes
retro_eeur_183, retro_eeur_255, retro_eeur_293, retro_eeur_551, retro_eeur_632, retro_eeur_639, retro_eeur_640,
Felis catus ENSFCAG00000022286 ortholog_one2one 1 retrogene
retro_fcat_1875,
Homo sapiens ENSG00000123975 ortholog_one2one 1 retrogene
retro_hsap_4183,
Macaca mulatta ENSMMUG00000012534 ortholog_one2one 1 retrogene
retro_mmul_269,
Mus musculus ENSMUSG00000062248 ortholog_one2one 4 retrogenes
retro_mmus_1356, retro_mmus_1470, retro_mmus_2392, retro_mmus_409,
Nomascus leucogenys ENSNLEG00000008729 ortholog_one2one 1 retrogene
retro_nleu_1793,
Otolemur garnettii ENSOGAG00000028843 ortholog_one2one 1 retrogene
retro_ogar_798,
Ochotona princeps ENSOPRG00000007583 ortholog_one2one 3 retrogenes
retro_opri_111, retro_opri_1122, retro_opri_912,
Pongo abelii ENSPPYG00000025843 ortholog_one2many 1 retrogene
retro_pabe_57,
Pan troglodytes ENSPTRG00000021093 ortholog_one2one 1 retrogene
retro_ptro_2837,
Pteropus vampyrus ENSPVAG00000011011 ortholog_one2one 3 retrogenes
retro_pvam_1297, retro_pvam_1307, retro_pvam_605,
Rattus norvegicus ENSRNOG00000014130 possible_ortholog 5 retrogenes
retro_rnor_1209, retro_rnor_1909, retro_rnor_2742, retro_rnor_279, retro_rnor_402,
Sorex araneus ENSSARG00000002443 ortholog_one2one 1 retrogene
retro_sara_213,
Sus scrofa ENSSSCG00000021161 ortholog_one2one 2 retrogenes
retro_sscr_458, retro_sscr_675,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_269 79.75 100.00
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2. retro_itri_585 62.03 100.00
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3. retro_itri_774 67.95 96.20
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4. retro_itri_1058 78.08 92.41
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5. retro_itri_1306 74.03 96.20
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6. retro_itri_1429 82.28 100.00
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7. retro_itri_1632 61.63 100.00
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Download FASTA sequences of all ENSSTOG00000000048 retrocopies