Parental gene:

ENSCJAG00000007792

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:73343260..73348762(+)


>ENSCJAG00000007792
ATGGCCCACAAGCAGATCTACTACTCGGACAAGTACTTCGACGAGCACTACGAGTACCGGCATGTTATGTTACCCAGAGA
ACTTTCCAAACAAGTACCTAAAACTCATCTGATGTCTGAAGAGGAGTGGAGGAGACTTGGTGTCCAACAGAGTCTAGGCT
GGGTTCATTACATGATTCATGAGCCAGAACCACATATTCTTCTGTTTAGACGACCTCTTCCAAAAGATCAACAAAAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .01 RPM
SRP051959_skeletal_muscle 0 .28 RPM
SRP051959_lymph_node 6 .99 RPM
SRP051959_lung 2 .13 RPM
SRP051959_liver 2 .08 RPM
SRP051959_kidney 0 .71 RPM
SRP051959_heart 0 .12 RPM
SRP051959_colon 8 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002194 ortholog_one2many 2 retrogenes
retro_cfam_1495, retro_cfam_472,
Callithrix jacchus ENSCJAG00000033635 within_species_paralog 10 retrogenes
retro_cjac_13, retro_cjac_1441, retro_cjac_1478, retro_cjac_1779, retro_cjac_2040, retro_cjac_2212, retro_cjac_2649, retro_cjac_276, retro_cjac_57, retro_cjac_876,
Dasypus novemcinctus ENSDNOG00000009427 possible_ortholog 8 retrogenes
retro_dnov_1200, retro_dnov_1527, retro_dnov_195, retro_dnov_1984, retro_dnov_2530, retro_dnov_2532, retro_dnov_585, retro_dnov_755,
Erinaceus europaeus ENSEEUG00000004384 possible_ortholog 7 retrogenes
retro_eeur_183, retro_eeur_255, retro_eeur_293, retro_eeur_551, retro_eeur_632, retro_eeur_639, retro_eeur_640,
Echinops telfairi ENSETEG00000001260 ortholog_one2many 10 retrogenes
retro_etel_1194, retro_etel_1752, retro_etel_1839, retro_etel_229, retro_etel_590, retro_etel_704, retro_etel_717, retro_etel_721, retro_etel_838, retro_etel_979,
Felis catus ENSFCAG00000022286 ortholog_one2many 1 retrogene
retro_fcat_1875,
Homo sapiens ENSG00000123975 possible_ortholog 1 retrogene
retro_hsap_4183,
Macaca mulatta ENSMMUG00000012534 ortholog_one2one 1 retrogene
retro_mmul_269,
Mus musculus ENSMUSG00000062248 ortholog_one2many 4 retrogenes
retro_mmus_1356, retro_mmus_1470, retro_mmus_2392, retro_mmus_409,
Nomascus leucogenys ENSNLEG00000008729 ortholog_one2one 1 retrogene
retro_nleu_1793,
Otolemur garnettii ENSOGAG00000028843 ortholog_one2one 1 retrogene
retro_ogar_798,
Ochotona princeps ENSOPRG00000007583 possible_ortholog 3 retrogenes
retro_opri_111, retro_opri_1122, retro_opri_912,
Pongo abelii ENSPPYG00000025843 possible_ortholog 1 retrogene
retro_pabe_57,
Pan troglodytes ENSPTRG00000021093 possible_ortholog 1 retrogene
retro_ptro_2837,
Pteropus vampyrus ENSPVAG00000011011 ortholog_one2one 3 retrogenes
retro_pvam_1297, retro_pvam_1307, retro_pvam_605,
Rattus norvegicus ENSRNOG00000014130 ortholog_many2many 5 retrogenes
retro_rnor_1209, retro_rnor_1909, retro_rnor_2742, retro_rnor_279, retro_rnor_402,
Sorex araneus ENSSARG00000002443 possible_ortholog 1 retrogene
retro_sara_213,
Sus scrofa ENSSSCG00000021161 ortholog_one2one 2 retrogenes
retro_sscr_458, retro_sscr_675,
Ictidomys tridecemlineatus ENSSTOG00000000048 ortholog_one2many 7 retrogenes
retro_itri_1058, retro_itri_1306, retro_itri_1429, retro_itri_1632, retro_itri_269, retro_itri_585, retro_itri_774,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_261 96.20 100.00
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Download FASTA sequences of all ENSCJAG00000007792 retrocopies