Parental gene:

Tuba4a, ENSDORG00000000154

Aliases:None
Description:tubulin, alpha 4A [Source:MGI Symbol;Acc:MGI:1095410]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_4349:64222..67769(-)


>ENSDORG00000000154
ATGCGTGAATGCATCTCAGTCCATGTGGGGCAGGCAGGTGTCCAGATGGGCAATGCCTGCTGGGAGCTCTATTGCCTGGA
ACATGGGATTCAGCCTGATGGGCAGATGCCCAGCGACAAGACCATTGGTGGAGGGGATGACTCTTTCACCACCTTCTTCT
GTGAAACTGGCGCTGGAAAGCATGTGCCTCGGGCCGTCTTTGTGGATCTGGAACCCACTGTAATTGATGAGATCCGAAAT
GGCCCATACCGACAGTTGTTCCACCCAGAGCAGCTCATCACTGGGAAGGAGGATGCTGCTAACAACTATGCCCGTGGTCA
CTACACCATCGGCAAGGAGATCATTGACCCTGTGCTGGACCGGATCCGAAAGCTGTCTGACCAATGCACAGGACTTCAGG
GCTTCCTCGTATTCCACAGCTTCGGAGGGGGCACCGGCTCTGGCTTCACCTCTCTCCTGATGGAACGGCTCTCTGTGGAC
TATGGCAAGAAATCCAAGCTGGAGTTCTCCATCTACCCAGCCCCCCAGGTGTCCACAGCCGTGGTGGAACCCTACAACTC
CATCCTGACCACCCACACCACCCTGGAGCACTCAGACTGTGCCTTCATGGTGGACAATGAAGCCATCTATGACATCTGTC
GCCGCAACCTGGACATCGAGCGCCCAACCTACACCAACCTCAATCGCCTCATCAGCCAAATTGTCTCCTCCATCACAGCT
TCCCTGCGCTTTGATGGGGCCCTCAACGTGGACCTGACCGAGTTCCAGACCAACCTGGTGCCCTACCCTCGCATCCACTT
CCCCCTGGCCACCTATGCGCCAGTCATCTCGGCAGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCAGAGATCACCAATG
CCTGCTTTGAGCCTGCCAACCAGATGGTGAAGTGTGACCCGAGACATGGCAAGTACATGGCCTGCTGCCTGCTGTACCGC
GGAGATGTGGTGCCCAAGGACGTCAATGCCGCCATCGCTGCCATCAAGACCAAACGCAGCATCCAGTTTGTGGACTGGTG
CCCCACGGGTTTCAAGGTTGGCATCAACTACCAGCCTCCCACTGTGGTTCCCGGGGGTGACCTGGCCAAGGTGCAGCGTG
CGGTGTGCATGCTGAGCAACACGACCGCCATTGCTGAGGCCTGGGCCCGCCTGGACCACAAGTTCGACCTGATGTATGCC
AAGCGGGCTTTTGTACACTGGTATGTGGGTGAGGGCATGGAGGAGGGTGAGTTCTCTGAGGCCCGGGAGGATATGGCTGC
TCTGGAGAAGGATTATGAGGAGGTGGGCATCGACTCCTATGAGGACGAGGATGAGGGAGAAGAATAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008444 possible_ortholog 2 retrogenes
retro_chof_179, retro_chof_360,
Echinops telfairi ENSETEG00000010296 ortholog_one2one 2 retrogenes
retro_etel_1816, retro_etel_1993,
Felis catus ENSFCAG00000027277 ortholog_one2one 1 retrogene
retro_fcat_596,
Felis catus ENSFCAG00000028689 possible_ortholog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Macropus eugenii ENSMEUG00000010779 possible_ortholog 2 retrogenes
retro_meug_1648, retro_meug_2174,
Microcebus murinus ENSMICG00000000804 ortholog_one2one 1 retrogene
retro_mmur_103,
Otolemur garnettii ENSOGAG00000009435 possible_ortholog 1 retrogene
retro_ogar_240,
Pteropus vampyrus ENSPVAG00000010798 ortholog_one2one 1 retrogene
retro_pvam_1019,
Rattus norvegicus ENSRNOG00000003597 ortholog_one2one 1 retrogene
retro_rnor_2819,
Ictidomys tridecemlineatus ENSSTOG00000019497 ortholog_one2one 1 retrogene
retro_itri_203,
Tursiops truncatus ENSTTRG00000010042 ortholog_one2one 1 retrogene
retro_ttru_531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_460 78.99 52.23
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2. retro_dord_564 92.70 60.94
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3. retro_dord_786 91.72 98.88
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Download FASTA sequences of all ENSDORG00000000154 retrocopies