Parental gene:

Arf1, ENSDORG00000007603

Aliases:None
Description:ADP-ribosylation factor 1 [Source:MGI Symbol;Acc:MGI:99431]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_3563:14272..15217(+)


>ENSDORG00000007603
ATGGGGAATATCTTTGCAAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAGATGCGCATCCTCATGGTGGGCCTGGATGC
TGCCGGAAAGACGACAATTCTGTACAAACTGAAGCTGGGGGAGATCGTGACCACCATCCCCACCATAGGTTTCAACGTGG
AGACTGTGGAGTACAAGAACATCAGCTTCACTGTGTGGGATGTGGGCGGCCAGGACAAGATCCGGCCGCTGTGGCGCCAC
TACTTCCAGAACACCCAAGGCTTGATCTTCGTGGTGGACAGCAATGACAGAGAGCGTGTCAATGAGGCCCGTGAAGAGCT
CATGCGGATGCTGGCGGAGGATGAGCTCCGGGATGCTGTCCTCCTGGTGTTTGCCAACAAGCAGGACCTCCCCAATGCCA
TGAATGCTGCTGAAATCACAGACAAGCTGGGGCTGCACTCTCTACGCCACAGGAACTGGTACATTCAGGCCACCTGTGCC
ACCAGCGGGGACGGGCTCTATGAAGGACTGGACTGGCTGTCCAATCAGCTCCGGAACCAGAAGTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016671 possible_ortholog 10 retrogenes
retro_cjac_1295, retro_cjac_1691, retro_cjac_1719, retro_cjac_2189, retro_cjac_2896, retro_cjac_300, retro_cjac_3181, retro_cjac_3311, retro_cjac_3335, retro_cjac_390,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Dipodomys ordii ENSDORG00000004312 within_species_paralog 1 retrogene
retro_dord_731,
Gallus gallus ENSGALG00000005393 ortholog_one2one 1 retrogene
retro_ggal_7,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Myotis lucifugus ENSMLUG00000007020 possible_ortholog 6 retrogenes
retro_mluc_1631, retro_mluc_242, retro_mluc_2605, retro_mluc_428, retro_mluc_511, retro_mluc_876,
Macaca mulatta ENSMMUG00000002792 ortholog_one2one 3 retrogenes
retro_mmul_237, retro_mmul_541, retro_mmul_810,
Procavia capensis ENSPCAG00000014202 ortholog_one2one 2 retrogenes
retro_pcap_15, retro_pcap_23,
Pan troglodytes ENSPTRG00000002066 possible_ortholog 2 retrogenes
retro_ptro_112, retro_ptro_5,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_31 93.42 83.98
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2. retro_dord_351 89.80 80.11
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3. retro_dord_409 86.90 79.01
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4. retro_dord_573 94.51 100.00
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Download FASTA sequences of all ENSDORG00000007603 retrocopies