Parental gene:

TMEM185B, ENSECAG00000009399

Aliases:None
Description:transmembrane protein 185B [Source:RefSeq peptide;Acc:NP_001229250]
Organism:Horse (Equus caballus)
Coordinates:X:118824314..118861046(-)


>ENSECAG00000009399
ATGAACCTGAGGGGCCTCTTCCAGGACTTCAACCCGAGTAAATTCCTCATCTATGCCTGTCTGCTGCTGTTCTCTGTGCT
GCTGGCCCTTCGTCTGGATGGCATCATTCAGTGGAGTTATTGGGCTGTCTTTGCTCCAATATGGCTCTGGAAGTTAATGG
TCATTGTTGGAGCATCAGTTGGAACTGGAGTCTGGGCACGAAATCCCCAATATCGAGCAGAAGGAGAAACATGTGTGGAG
TTCAAAGCCATGTTAATTGCCGTGGGCATCCACTTGCTCCTGCTGATGTTTGAAGTTCTGGTCTGTGACAGGATTGAGAG
AGGAAGCCATTTCTGGCTTCTGGTCTTCATGCCGCTGTTCTTCGTTTCCCCGGTGTCTGTTGCAGCTTGTGTTTGGGGCT
TTCGACATGACAGGTCACTGGAGTTAGAAATCCTGTGTTCTGTCAACATTCTCCAGTTTATATTCATTGCCTTAAGACTG
GACAAGATCATCCACTGGCCCTGGCTTGTCGTGTGTGTCCCCCTGTGGATTCTCATGTCCTTTCTGTGCCTGGTGGTCCT
CTATTACATTGTGTGGTCCGTCCTGTTCCTGCGCTCCATGGATGTGATTGCAGAACAGCGAAGGACACACATAACAATGG
CACTGAGCTGGATGACCATTGTTGTGCCTCTCCTTACTTTTGAGATCCTGCTGGTTCACAAACTGGATGGCCACAATGCA
TTCTCTTGTATTCCAATATTTGTCCCTCTTTGGCTTTCTTTGATCACTCTGATGGCAACCACATTCGGACAGAAGGGAGG
GAACCACTGGTGGTTTGGTATTCGCAAGGATTTCTGTCAGTTTCTGCTTGAAATATTCCCGTTTTTGAGAGAATACGGAA
ATATTTCCTATGACCTCCATCATGAAGATAATGAGGAAACCGAAGAAACTCCAGTTCCAGAACCTCCGAAAATCGCTCCT
ATGTTTCGAAAGAAGACCAGGGTAGTTATCACCCAGAGTCCTGGAAAGTATGTCCTCCCCCCTCCTAAATTAAATATTGA
AATGCCGGATTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 8 .56 RPM
SRP021940_cerebellum 23 .32 RPM
SRP021940_embryo 12 .61 RPM
SRP021940_placental_villous 17 .08 RPM
SRP021940_synovial_membrane 8 .04 RPM
SRP021940_testis 8 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008637 ortholog_one2one 1 retrogene
retro_acar_65,
Ailuropoda melanoleuca ENSAMEG00000009351 ortholog_one2one 1 retrogene
retro_amel_8,
Bos taurus ENSBTAG00000006818 ortholog_one2one 1 retrogene
retro_btau_1,
Canis familiaris ENSCAFG00000019103 ortholog_one2one 1 retrogene
retro_cfam_159,
Cavia porcellus ENSCPOG00000003622 ortholog_one2one 1 retrogene
retro_cpor_5,
Dasypus novemcinctus ENSDNOG00000011864 ortholog_one2one 1 retrogene
retro_dnov_2451,
Dipodomys ordii ENSDORG00000015027 ortholog_one2one 1 retrogene
retro_dord_67,
Felis catus ENSFCAG00000024483 ortholog_one2one 1 retrogene
retro_fcat_1116,
Homo sapiens ENSG00000155984 ortholog_one2one 1 retrogene
retro_hsap_104,
Gorilla gorilla ENSGGOG00000024268 ortholog_one2many 1 retrogene
retro_ggor_189,
Loxodonta africana ENSLAFG00000003044 ortholog_one2many 1 retrogene
retro_lafr_898,
Microcebus murinus ENSMICG00000004639 ortholog_one2one 1 retrogene
retro_mmur_106,
Myotis lucifugus ENSMLUG00000001319 ortholog_one2one 1 retrogene
retro_mluc_2075,
Macaca mulatta ENSMMUG00000002888 ortholog_one2one 1 retrogene
retro_mmul_310,
Mustela putorius furo ENSMPUG00000011896 ortholog_one2one 1 retrogene
retro_mputfur_46,
Mus musculus ENSMUSG00000073139 ortholog_one2one 1 retrogene
retro_mmus_358,
Nomascus leucogenys ENSNLEG00000013487 ortholog_one2one 1 retrogene
retro_nleu_2723,
Otolemur garnettii ENSOGAG00000016414 ortholog_one2many 1 retrogene
retro_ogar_88,
Procavia capensis ENSPCAG00000009160 ortholog_one2one 1 retrogene
retro_pcap_260,
Pongo abelii ENSPPYG00000020809 ortholog_one2one 1 retrogene
retro_pabe_118,
Pteropus vampyrus ENSPVAG00000013822 ortholog_one2one 1 retrogene
retro_pvam_30,
Rattus norvegicus ENSRNOG00000011047 ortholog_one2one 1 retrogene
retro_rnor_6,
Sus scrofa ENSSSCG00000012739 ortholog_one2one 1 retrogene
retro_sscr_494,
Ictidomys tridecemlineatus ENSSTOG00000014484 ortholog_one2one 1 retrogene
retro_itri_8,
Tursiops truncatus ENSTTRG00000000643 ortholog_one2one 1 retrogene
retro_ttru_868,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_426 90.29 100.00
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Download FASTA sequences of all ENSECAG00000009399 retrocopies