Parental gene:

TMEM185A, ENSSSCG00000012739

Aliases:None
Description:transmembrane protein 185A [Source:HGNC Symbol;Acc:17125]
Organism:Pig (Sus scrofa)
Coordinates:X:139168559..139182299(-)


>ENSSSCG00000012739
GACTTTTCTCCTAGTAAATTCCTCATCTATGCCTGTCTGCTGCTGTTCTCTGTGTTGCTGGCCCTTCGTCTAGATGGCAT
CATTCAGTGGAGCTACTGGGCCGTCTTTGCTCCCATATGGCTGTGGAAGCTAATGGTCATTGTTGGAGCCTCGGTTGGAA
CCGGAGTCTGGGCACGAAATCCCCAATATCGAGCAGAAGGAGAAACCTGTGTGGAGTTCAAGGCCATGCTGATCGCCGTG
GGCATCCACCTGCTCCTGCTGATGTTCGAAGTGCTGGTCTGTGACCGGATCGAGAGAGGCAGCCACTTCTGGCTCCTGGT
CTTCATGCCGCTCTTCTTCGTCTCCCCGGTGTCCGTGGCAGCTTGCGTTTGGGGCTTTCGGCACGACAGGTCACTGGAGT
TAGAAATCCTGTGTTCTGTCAACATTCTCCAGTTTATATTCATTGCCTTAAGACTGGACAAGATCATCCACTGGCCCTGG
CTTGTGGTGTGCGTCCCCCTGTGGATTCTCATGTCCTTCCTGTGCCTGGTGGTCCTCTACTACATCGTGTGGTCCGTCCT
CTTCCTGCGCTCCATGGACGTGCTCGCAGAGCAGCGGCGGACGCACATCACGATGGCGCTGAGCTGGATGACCATCGTCG
TGCCTCTCCTTACTTTCGAGATCCTGCTGGTGCACAAGCTGGACGGCCACAATGCATTCTCTTGTATCCCGATCTTCGTC
CCCCTGTGGCTTTCCTTGATCACCCTGATGGCAACCACGTTCGGCCAGAAAGGCGGAAACCACTGGTGGTTTGGTATCCG
CAAGGACTTCTGTCAGTTTCTGCTTGAAGTCTTCCCGTTTTTGCGAGAGTACGGAAACATTTCCTACGACCTGCACCATG
AAGAGAATGAGGAAACCGAAGAAACGCCGGTTCCAGAACCTCCGAAGATCGCTCCTATGTTTCGAAAGAAGGCCAGGGTA
GTTATCACCCAGAGCCCTGGAAAGTATGTCCTGCCGCCTCCCAAGCTAAATATCGAGATGCCAGATTAG

Library Parental gene expression (RPM)
SRP014902_placenta 63 .58 RPM
SRP014902_testis 31 .26 RPM
SRP018288_heart 10 .19 RPM
SRP018288_kidney 14 .58 RPM
SRP018288_liver 4 .16 RPM
SRP018288_lung 18 .23 RPM
SRP018856_adipose 60 .21 RPM
SRP035408_brain 13 .72 RPM
SRP035408_liver 3 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008637 ortholog_one2one 1 retrogene
retro_acar_65,
Ailuropoda melanoleuca ENSAMEG00000009351 ortholog_one2one 1 retrogene
retro_amel_8,
Cavia porcellus ENSCPOG00000003622 ortholog_one2one 1 retrogene
retro_cpor_5,
Dasypus novemcinctus ENSDNOG00000011864 ortholog_one2one 1 retrogene
retro_dnov_2451,
Dipodomys ordii ENSDORG00000015027 ortholog_one2one 1 retrogene
retro_dord_67,
Equus caballus ENSECAG00000009399 ortholog_one2one 1 retrogene
retro_ecab_426,
Homo sapiens ENSG00000155984 ortholog_one2one 1 retrogene
retro_hsap_104,
Gorilla gorilla ENSGGOG00000024268 possible_ortholog 1 retrogene
retro_ggor_189,
Loxodonta africana ENSLAFG00000003044 ortholog_one2many 1 retrogene
retro_lafr_898,
Microcebus murinus ENSMICG00000004639 ortholog_one2one 1 retrogene
retro_mmur_106,
Myotis lucifugus ENSMLUG00000001319 ortholog_one2one 1 retrogene
retro_mluc_2075,
Macaca mulatta ENSMMUG00000002888 ortholog_one2one 1 retrogene
retro_mmul_310,
Mustela putorius furo ENSMPUG00000011896 ortholog_one2one 1 retrogene
retro_mputfur_46,
Mus musculus ENSMUSG00000073139 ortholog_one2one 1 retrogene
retro_mmus_358,
Nomascus leucogenys ENSNLEG00000013487 ortholog_one2one 1 retrogene
retro_nleu_2723,
Otolemur garnettii ENSOGAG00000016414 ortholog_one2one 1 retrogene
retro_ogar_88,
Pongo abelii ENSPPYG00000020809 ortholog_one2one 1 retrogene
retro_pabe_118,
Pteropus vampyrus ENSPVAG00000013822 ortholog_one2one 1 retrogene
retro_pvam_30,
Rattus norvegicus ENSRNOG00000011047 ortholog_one2one 1 retrogene
retro_rnor_6,
Ictidomys tridecemlineatus ENSSTOG00000014484 ortholog_one2one 1 retrogene
retro_itri_8,
Tursiops truncatus ENSTTRG00000000643 ortholog_one2one 1 retrogene
retro_ttru_868,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_494 87.46 100.00
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Download FASTA sequences of all ENSSSCG00000012739 retrocopies