Parental gene:

ENSFCAG00000022091

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:D3:28280101..28284449(+)


>ENSFCAG00000022091
TCCCAGCGCGAGTGCATCTCTATCCACGTGGGGCAGGCAGGTGTCCAGATCGGCAATGCCTGCTGGGAACTGTACTGCCT
TGAACATGGAATTCAGCCCGATGGTCAGATGCCAAGTGACAAAACCATCGGTGGTGGGGATGACTCGTTCAACACGTTCT
TCAGCGAGACTGGGGCTGGCAAGCATGTGCCCAGAGCGGTGTTTGTGGACCTGGAGCCCACCGTGGTCGATGAAGTGCGC
ACAGGGACCTACAGGCAGCTCTTCCACCCAGAGCAGCTGATCACCGGGAAGGAGGACGCAGCCAATAATTACGCCAGAGG
CCATTATACCATCGGCAGGGAGATCGTCGACCTGGTCCTGGACCGGATCCGAAAACTGGCGGATCTGTGCACGGGGCTGC
AGGGCTTCCTCATCTTCCACAGTTTCGGGGGCACCGGCTCTGGGTTTGCGTCCCTGCTCATGGAGCGGCTGTCGGTGGAC
TACGGGAAGTCCAAGCTGGAGTTTGCCATCTACCCGGCCCCCCAGGTGTCCACGGCCGTGGTGGAGCCCTACAACTCCAT
CCTGACCACCCACACGACCCTGGAGCATTCTGACTGTGCCTTCATGGTGGACAACGAAGCCATCTACGACATATGTCGGC
GCAACCTGGATATCGAGCGGCCCACGTACACCAACCTTAATCGTCTGATCGGGCAGATCGTGTCCTCCATCACGGCCTCC
CTGCGATTTGATGGGGCCCTGAACGTGGACTTGACGGAATTCCAGACCAACCTGGTCCCCTACCCCCGCATCCACTTCCC
CCTGGCCACCTACGCCCCGGTCATCTCAGCTGAGAAGGCGTACCACGAGCAGCTGTCTGTGGCCGAGATCACCAATGCCT
GTTTTGAGCCGGCTCAGATGGTCAAGTGTGACCCTCGGCACGGCAAGTATATGGCCTGCTGCATGTTGTACAGGGGGGAC
GTGGTCCCGAAAGATGTCAACGCAGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTTTGTGGATTGGTGCCCAAC
TGGATTTAAGGTGGGCATCAACTACCAACCCCCCACCGTCGTCCCCGGAGGGGACCTGGCCAGGGTGCAGCGGGCCGTGT
GCATGCTGAGCAACACTACCGCCATTGCCGAGGCCTGGGCCCGCCTAGACCATAAGTTTGACCTCATGTATGCAAAGCGA
GCCTTTGTGCACTGGTACGTGGGGGAAGGCATGGAGGAAGGGGAGTTCTCCGAGGCCCGGGAGGACCTGGCAGCTCTGGA
GAAAGATTATGAAGAGGTGGGCGTGGATTCCGTGGAAGCAGAGGCTGAAGAAGGGGAAGAATACTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .10 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011042 ortholog_one2one 2 retrogenes
retro_amel_488, retro_amel_518,
Equus caballus ENSECAG00000014403 ortholog_one2many 1 retrogene
retro_ecab_318,
Felis catus ENSFCAG00000024852 within_species_paralog 1 retrogene
retro_fcat_361,
Felis catus ENSFCAG00000027011 within_species_paralog 1 retrogene
retro_fcat_588,
Felis catus ENSFCAG00000027277 within_species_paralog 1 retrogene
retro_fcat_596,
Felis catus ENSFCAG00000028689 within_species_paralog 3 retrogenes
retro_fcat_1802, retro_fcat_254, retro_fcat_798,
Mus musculus ENSMUSG00000067338 possible_ortholog 1 retrogene
retro_mmus_3356,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_647 67.56 65.40
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2. retro_fcat_1375 71.28 87.28
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Download FASTA sequences of all ENSFCAG00000022091 retrocopies