Parental gene:

AP1S1, ENSFCAG00000029169

Aliases:None
Description:adaptor-related protein complex 1, sigma 1 subunit [Source:HGNC Symbol;Acc:559]
Organism:Cat (Felis catus)
Coordinates:E3:7761733..7769230(+)


>ENSFCAG00000029169
ATGATGCGATTCATGCTGCTGTTCAGCCGGCAGGGGAAGCTGCGGCTGCAAAAATGGTACCTGGCCACATCGGACAAGGA
GCGAAAGAAAATGGTTCGGGAGCTTATGCAGGTGGTCCTGGCTCGCAAGCCCAAGATGTGCAGCTTCCTGGAGTGGAGGG
ATCTCAAAGTCGTCTATAAGAGATATGCCAGCCTCTACTTCTGCTGCGCCATCGAGGGCCAAGACAATGAGCTCATCACG
CTGGAGCTGATCCACCGATATGTGGAGCTCCTGGACAAATACTTCGGCAGCGTGTGCGAGCTGGACATCATCTTCAACTT
TGAGAAGGCCTACTTCATCTTGGACGAGTTTCTGATGGGGGGAGACGTCCAGGACACCTCCAAGAAGAGTGTGCTGAAGG
CCATCGAGCAGGCAGACCTGCTGCAGGAGGAGGATGAGTCGCCTCGCAGTGTGCTGGAGGAGATGGGTCTGGCGTAG

Library Parental gene expression (RPM)
SRP017611_brain 66 .91 RPM
SRP017611_kidney 35 .66 RPM
SRP017611_liver 13 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002673 ortholog_one2one 1 retrogene
retro_amel_210,
Homo sapiens ENSG00000106367 ortholog_one2one 1 retrogene
retro_hsap_3765,
Macropus eugenii ENSMEUG00000016245 ortholog_one2one 3 retrogenes
retro_meug_1011, retro_meug_154, retro_meug_2051,
Microcebus murinus ENSMICG00000005406 ortholog_one2one 2 retrogenes
retro_mmur_1026, retro_mmur_1368,
Myotis lucifugus ENSMLUG00000009898 ortholog_one2one 2 retrogenes
retro_mluc_1493, retro_mluc_2061,
Mustela putorius furo ENSMPUG00000015867 ortholog_one2one 1 retrogene
retro_mputfur_1184,
Pan troglodytes ENSPTRG00000019520 ortholog_one2one 3 retrogenes
retro_ptro_1234, retro_ptro_24, retro_ptro_2554,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_152 58.27 86.71
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Download FASTA sequences of all ENSFCAG00000029169 retrocopies