Parental gene:

AP1S1, ENSPTRG00000019520

Aliases:None
Description:Adaptor-related protein complex 1, sigma 1 subunit [Source:UniProtKB/TrEMBL;Acc:K7B188]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:101761796..101768633(+)


>ENSPTRG00000019520
ATGCGGTTCATGCTATTATTCAGCCGGCAGGGAAAACTGCGGCTGCAAAAATGGTACCTGGCCACTTCGGACAAGGAACG
GAAGAAGATGGTGCGCGAGCTTATGCAGGTTGTCCTGGCTCGCAAGCCCAAGATGTGCAGCTTCCTGGAGTGGAGGGATC
TCAAAGTTGTCTATAAGAGATATGCCAGCCTCTACTTCTGCTGCGCCATCGAGGGCCAAGACAATGAGCTCATCACACTG
GAGCTGATCCACCGATACGTGGAGCTCTTAGACAAATACTTTGGCAGTGTGTGCGAGCTGGACATCATCTTCAACTTTGA
GAAGGCCTACTTCATCCTGGATGAGTTTTTGATGGGGGGGGATGTCCAGGACACCTCCAAGAAGAGTGTGCTGAAAGCCA
TCGAGCAGGCTGACCTACTGCAGGAGGAGGATGAGTCGCCGCGGAGTGTGCTGGAGGAGATGGGTTTGGCATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 107 .00 RPM
SRP007412_cerebellum 29 .79 RPM
SRP007412_heart 4 .43 RPM
SRP007412_kidney 87 .61 RPM
SRP007412_liver 45 .34 RPM
SRP007412_testis 6 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002673 ortholog_one2one 1 retrogene
retro_amel_210,
Felis catus ENSFCAG00000029169 ortholog_one2one 1 retrogene
retro_fcat_152,
Homo sapiens ENSG00000106367 ortholog_one2one 1 retrogene
retro_hsap_3765,
Macropus eugenii ENSMEUG00000016245 ortholog_one2one 3 retrogenes
retro_meug_1011, retro_meug_154, retro_meug_2051,
Microcebus murinus ENSMICG00000005406 ortholog_one2one 2 retrogenes
retro_mmur_1026, retro_mmur_1368,
Myotis lucifugus ENSMLUG00000009898 ortholog_one2one 2 retrogenes
retro_mluc_1493, retro_mluc_2061,
Mustela putorius furo ENSMPUG00000015867 ortholog_one2one 1 retrogene
retro_mputfur_1184,
Pan troglodytes ENSPTRG00000006239 within_species_paralog 1 retrogene
retro_ptro_2368,
Pan troglodytes ENSPTRG00000012979 within_species_paralog 1 retrogene
retro_ptro_2258,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_24 88.73 90.45
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_1234 89.57 73.25
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ptro_2554 52.13 59.87
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000019520 retrocopies