RetrogeneDB ID: | retro_mluc_1493 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429849:1114236..1114503(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AP1S1 | ||
Ensembl ID: | ENSMLUG00000009898 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.64 % |
Parental protein coverage: | 53.29 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | RKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGS |
R.KMV.ELMQV.LARKPKM.SFL.WRDLKVVYKRYA.LYFCC.IEGQDNELITLELIHRYVELLD..FG. | |
Retrocopy | REKMVLELMQVALARKPKMHSFLKWRDLKVVYKRYANLYFCCTIEGQDNELITLELIHRYVELLDQSFGN |
Parental | VCELDIIFNFEKAYFILDE |
VCELDIIFNFEK.YFILDE | |
Retrocopy | VCELDIIFNFEKGYFILDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000002673 | 1 retrocopy | |
Felis catus | ENSFCAG00000029169 | 1 retrocopy | |
Homo sapiens | ENSG00000106367 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000016245 | 3 retrocopies | |
Microcebus murinus | ENSMICG00000005406 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000009898 | 2 retrocopies |
retro_mluc_1493 , retro_mluc_2061,
|
Myotis lucifugus | ENSMLUG00000011671 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015867 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000019520 | 3 retrocopies |