Parental gene: | SS18L2, ENSG00000008324 |
| Aliases: | SS18L2, KIAA-iso |
| Description: | synovial sarcoma translocation gene on chromosome 18-like 2 [Source:HGNC Symbol;Acc:15593] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 3:42623331..42636606(+) |
>ENSG00000008324
ATGTCGGTGGCCTTCGTACCGGACTGGCTGAGGGGCAAGGCGGAAGTCAATCAAGAGACTATCCAGCGGCTCCTTGAGGA
GAATGACCAGCTGATCCGCTGTATTGTGGAGTATCAGAACAAGGGCCGCGGGAACGAGTGCGTGCAGTACCAGCATGTGT
TACATAGAAATCTCATTTATTTGGCTACCATTGCAGATGCCAGTCCAACCAGCACTTCAAAAGCAATGGAATAA
ATGTCGGTGGCCTTCGTACCGGACTGGCTGAGGGGCAAGGCGGAAGTCAATCAAGAGACTATCCAGCGGCTCCTTGAGGA
GAATGACCAGCTGATCCGCTGTATTGTGGAGTATCAGAACAAGGGCCGCGGGAACGAGTGCGTGCAGTACCAGCATGTGT
TACATAGAAATCTCATTTATTTGGCTACCATTGCAGATGCCAGTCCAACCAGCACTTCAAAAGCAATGGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 7 .61 RPM |
| bodymap2_lung | 17 .93 RPM |
| bodymap2_breast | 6 .93 RPM |
| bodymap2_adipose | 7 .35 RPM |
| bodymap2_adrenal | 13 .16 RPM |
| bodymap2_skeletal_muscle | 5 .29 RPM |
| bodymap2_thyroid | 9 .06 RPM |
| bodymap2_prostate | 11 .95 RPM |
| bodymap2_colon | 10 .13 RPM |
| bodymap2_testis | 7 .35 RPM |
| bodymap2_brain | 9 .70 RPM |
| bodymap2_heart | 3 .78 RPM |
| bodymap2_white_blood_cells | 21 .70 RPM |
| bodymap2_lymph_node | 27 .78 RPM |
| bodymap2_ovary | 7 .56 RPM |
| bodymap2_kidney | 9 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000000989 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000015005 | possible_ortholog | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000021542 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013024 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000031677 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005848 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015198 | possible_ortholog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000013979 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_557 | 92.19 | 83.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000008324 retrocopies