Parental gene:

SS18L2, ENSG00000008324

Aliases:SS18L2, KIAA-iso
Description:synovial sarcoma translocation gene on chromosome 18-like 2 [Source:HGNC Symbol;Acc:15593]
Organism:Human (Homo sapiens)
Coordinates:3:42623331..42636606(+)


>ENSG00000008324
ATGTCGGTGGCCTTCGTACCGGACTGGCTGAGGGGCAAGGCGGAAGTCAATCAAGAGACTATCCAGCGGCTCCTTGAGGA
GAATGACCAGCTGATCCGCTGTATTGTGGAGTATCAGAACAAGGGCCGCGGGAACGAGTGCGTGCAGTACCAGCATGTGT
TACATAGAAATCTCATTTATTTGGCTACCATTGCAGATGCCAGTCCAACCAGCACTTCAAAAGCAATGGAATAA

Library Parental gene expression (RPM)
bodymap2_adipose 7 .35 RPM
bodymap2_adrenal 13 .16 RPM
bodymap2_brain 9 .70 RPM
bodymap2_breast 6 .93 RPM
bodymap2_colon 10 .13 RPM
bodymap2_heart 3 .78 RPM
bodymap2_kidney 9 .91 RPM
bodymap2_liver 7 .61 RPM
bodymap2_lung 17 .93 RPM
bodymap2_lymph_node 27 .78 RPM
bodymap2_ovary 7 .56 RPM
bodymap2_prostate 11 .95 RPM
bodymap2_skeletal_muscle 5 .29 RPM
bodymap2_testis 7 .35 RPM
bodymap2_thyroid 9 .06 RPM
bodymap2_white_blood_cells 21 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000000989 ortholog_one2one 1 retrogene
retro_acar_189,
Dipodomys ordii ENSDORG00000015005 possible_ortholog 4 retrogenes
retro_dord_286, retro_dord_39, retro_dord_643, retro_dord_658,
Loxodonta africana ENSLAFG00000021542 possible_ortholog 2 retrogenes
retro_lafr_754, retro_lafr_92,
Myotis lucifugus ENSMLUG00000013024 possible_ortholog 1 retrogene
retro_mluc_21,
Macaca mulatta ENSMMUG00000031677 ortholog_one2one 1 retrogene
retro_mmul_2392,
Nomascus leucogenys ENSNLEG00000005848 ortholog_one2one 1 retrogene
retro_nleu_2639,
Ochotona princeps ENSOPRG00000015198 possible_ortholog 4 retrogenes
retro_opri_401, retro_opri_516, retro_opri_542, retro_opri_593,
Pongo abelii ENSPPYG00000013979 ortholog_one2one 2 retrogenes
retro_pabe_513, retro_pabe_651,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_557 92.19 83.12
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Download FASTA sequences of all ENSG00000008324 retrocopies