Parental gene:

CSNK1A1, ENSG00000113712

Aliases:CSNK1A1, CK1, CK1a, CKIa, HEL-S-77p, HLCDGP1, PRO2975
Description:casein kinase 1, alpha 1 [Source:HGNC Symbol;Acc:2451]
Organism:Human (Homo sapiens)
Coordinates:5:148871759..148931007(-)


>ENSG00000113712
ATGGCGAGTAGCAGCGGCTCCAAGGCTGAATTCATTGTCGGAGGGAAATATAAACTGGTACGGAAGATCGGGTCTGGCTC
CTTCGGGGACATCTATTTGGCGATCAACATCACCAACGGCGAGGAAGTGGCAGTGAAGCTAGAATCTCAGAAGGCCAGGC
ATCCCCAGTTGCTGTACGAGAGCAAGCTCTATAAGATTCTTCAAGGTGGGGTTGGCATCCCCCACATACGGTGGTATGGT
CAGGAAAAAGACTACAATGTACTAGTCATGGATCTTCTGGGACCTAGCCTCGAAGACCTCTTCAATTTCTGTTCAAGAAG
GTTCACAATGAAAACTGTACTTATGTTAGCTGACCAGATGATCAGTAGAATTGAATATGTGCATACAAAGAATTTTATAC
ACAGAGACATTAAACCAGATAACTTCCTAATGGGTATTGGGCGTCACTGTAATAAGTGTTTAGAATCTCCAGTGGGGAAG
AGGAAAAGAAGCATGACTGTTAGTACTTCTCAGGACCCATCTTTCTCAGGATTAAACCAGTTATTCCTTATTGATTTTGG
TTTGGCCAAAAAGTACAGAGACAACAGGACAAGGCAACACATACCATACAGAGAAGATAAAAACCTCACTGGCACTGCCC
GATATGCTAGCATCAATGCACATCTTGGTATTGAGCAGAGTCGCCGAGATGACATGGAATCATTAGGATATGTTTTGATG
TATTTTAATAGAACCAGCCTGCCATGGCAAGGGCTAAAGGCTGCAACAAAGAAACAAAAATATGAAAAGATTAGTGAAAA
GAAGATGTCCACGCCTGTTGAAGTTTTATGTAAGGGGTTTCCTGCAGAATTTGCGATGTACTTAAACTATTGTCGTGGGC
TACGCTTTGAGGAAGCCCCAGATTACATGTATCTGAGGCAGCTATTCCGCATTCTTTTCAGGACCCTGAACCATCAATAT
GACTACACATTTGATTGGACAATGTTAAAGCAGAAAGCAGCACAGCAGGCAGCCTCTTCCAGTGGGCAGGGTCAGCAGGC
CCAAACCCCCACAGGCAAGCAAACTGACAAAACCAAGAGTAACATGAAAGGTTTCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 101 .52 RPM
bodymap2_adrenal 68 .80 RPM
bodymap2_brain 65 .09 RPM
bodymap2_breast 69 .55 RPM
bodymap2_colon 75 .87 RPM
bodymap2_heart 66 .11 RPM
bodymap2_kidney 58 .63 RPM
bodymap2_liver 30 .67 RPM
bodymap2_lung 103 .55 RPM
bodymap2_lymph_node 51 .86 RPM
bodymap2_ovary 90 .33 RPM
bodymap2_prostate 74 .72 RPM
bodymap2_skeletal_muscle 79 .77 RPM
bodymap2_testis 71 .62 RPM
bodymap2_thyroid 98 .17 RPM
bodymap2_white_blood_cells 95 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005326 possible_ortholog 2 retrogenes
retro_btau_1662, retro_btau_49,
Canis familiaris ENSCAFG00000018286 possible_ortholog 1 retrogene
retro_cfam_1887,
Callithrix jacchus ENSCJAG00000021121 ortholog_one2one 1 retrogene
retro_cjac_2680,
Gorilla gorilla ENSGGOG00000013926 possible_ortholog 3 retrogenes
retro_ggor_1178, retro_ggor_742, retro_ggor_984,
Myotis lucifugus ENSMLUG00000002910 ortholog_one2one 4 retrogenes
retro_mluc_1531, retro_mluc_2134, retro_mluc_2215, retro_mluc_597,
Macaca mulatta ENSMMUG00000001758 ortholog_one2one 2 retrogenes
retro_mmul_2207, retro_mmul_295,
Monodelphis domestica ENSMODG00000009937 ortholog_one2one 1 retrogene
retro_mdom_2005,
Oryctolagus cuniculus ENSOCUG00000006669 ortholog_one2one 7 retrogenes
retro_ocun_1068, retro_ocun_1098, retro_ocun_1506, retro_ocun_500, retro_ocun_502, retro_ocun_506, retro_ocun_644,
Sorex araneus ENSSARG00000011446 possible_ortholog 1 retrogene
retro_sara_518,
Sarcophilus harrisii ENSSHAG00000015356 possible_ortholog 1 retrogene
retro_shar_834,
Sus scrofa ENSSSCG00000014435 possible_ortholog 1 retrogene
retro_sscr_560,
Ictidomys tridecemlineatus ENSSTOG00000022141 possible_ortholog 1 retrogene
retro_itri_1378,
Drosophila melanogaster FBgn0015024 ortholog_one2many 4 retrogenes
retro_dmel_10, retro_dmel_32, retro_dmel_40, retro_dmel_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_32 91.04 99.41
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Download FASTA sequences of all ENSG00000113712 retrocopies