Parental gene:

CSNK1A1, ENSMMUG00000001758

Aliases:None
Description:casein kinase I isoform alpha [Source:RefSeq peptide;Acc:NP_001248164]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:145972034..146027995(-)


>ENSMMUG00000001758
ATGGCGAGTAGCAGCGGCTCTAAGGCCGAATTCATTGTCGGAGGGAAATATAAACTGGTACGGAAGATCGGGTCTGGCTC
CTTCGGGGACATCTATCTGGCGATCAACATCACCAACGGCGAGGAAGTGGCCGTGAAGCTAGAATCTCAGAAGGCCAGGC
ATCCCCAGTTGCTGTACGAGAGCAAGCTCTATAAGATTCTTCAAGGTGGGGTTGGCATCCCCCACATACGGTGGTATGGT
CAGGAAAAAGACTACAATGTACTAGTCATGGATCTTCTGGGACCTAGCCTCGAAGACCTCTTCAATTTCTGTTCAAGAAG
GTTCACAATGAAAACTGTACTTATGTTAGCTGACCAGATGATCAGTAGAATTGAATATGTGCATACAAAGAATTTTATAC
ACAGAGACATTAAACCAGATAACTTCCTAATGGGTATTGGGCGTCACTGTAATAAGTGTTTAGAATCTCCAGTGGGGAAG
AGGAAAAGAAGCATGACTGTTAGTACTTCTCAGGACCCATCTTTCTCAGGATTAAACCAGTTATTCCTTATTGATTTTGG
TTTGGCCAAAAAGTACAGAGACAACAGGACAAGGCAACACATACCATACAGAGAAGATAAAAACCTCACTGGCACTGCCC
GATATGCTAGCATCAATGCACATCTTGGTATTGAGCAGAGTCGCCGAGATGACATGGAATCATTAGGATATGTTTTGATG
TATTTTAATAGAACCAGCCTGCCATGGCAAGGGCTAAAGGCTGCAACAAAGAAACAAAAATATGAAAAGATTAGTGAAAA
GAAGATGTCCACGCCTGTTGAAGTTTTATGTAAGGGGTTTCCTGCAGAATTTGCCATGTACTTAAACTATTGTCGTGGGC
TACGCTTTGAGGAAGCCCCAGATTACATGTATCTGAGGCAGCTATTCCGCATTCTTTTCAGGACCCTGAACCATCAATAT
GACTACACGTTTGATTGGACAATGTTAAAGCAGAAAGCAGCACAGCAGGCAGCCTCTTCCAGTGGGCAGGGTCAGCAGGC
CCAAACCCCCACAGGCAAGCAAACTGACAAAACCAAGAGTAACATGAAAGGTTAG

Library Parental gene expression (RPM)
SRP007412_brain 71 .26 RPM
SRP007412_brain_prefrontal_cortex 67 .43 RPM
SRP007412_cerebellum 90 .15 RPM
SRP007412_heart 59 .12 RPM
SRP007412_kidney 68 .19 RPM
SRP007412_liver 29 .89 RPM
SRP007412_testis 69 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005326 possible_ortholog 2 retrogenes
retro_btau_1662, retro_btau_49,
Canis familiaris ENSCAFG00000018286 possible_ortholog 1 retrogene
retro_cfam_1887,
Callithrix jacchus ENSCJAG00000021121 ortholog_one2one 1 retrogene
retro_cjac_2680,
Homo sapiens ENSG00000113712 ortholog_one2one 1 retrogene
retro_hsap_32,
Gorilla gorilla ENSGGOG00000013926 possible_ortholog 3 retrogenes
retro_ggor_1178, retro_ggor_742, retro_ggor_984,
Myotis lucifugus ENSMLUG00000002910 ortholog_one2one 4 retrogenes
retro_mluc_1531, retro_mluc_2134, retro_mluc_2215, retro_mluc_597,
Macaca mulatta ENSMMUG00000006620 other_paralog 1 retrogene
retro_mmul_1195,
Macaca mulatta ENSMMUG00000006646 other_paralog 1 retrogene
retro_mmul_1040,
Monodelphis domestica ENSMODG00000009937 ortholog_one2one 1 retrogene
retro_mdom_2005,
Oryctolagus cuniculus ENSOCUG00000006669 ortholog_one2one 7 retrogenes
retro_ocun_1068, retro_ocun_1098, retro_ocun_1506, retro_ocun_500, retro_ocun_502, retro_ocun_506, retro_ocun_644,
Sorex araneus ENSSARG00000011446 possible_ortholog 1 retrogene
retro_sara_518,
Sarcophilus harrisii ENSSHAG00000015356 possible_ortholog 1 retrogene
retro_shar_834,
Sus scrofa ENSSSCG00000014435 possible_ortholog 1 retrogene
retro_sscr_560,
Ictidomys tridecemlineatus ENSSTOG00000022141 possible_ortholog 1 retrogene
retro_itri_1378,
Drosophila melanogaster FBgn0015024 ortholog_one2many 4 retrogenes
retro_dmel_10, retro_dmel_32, retro_dmel_40, retro_dmel_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_295 92.24 99.41
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2. retro_mmul_2207 87.29 70.03
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Download FASTA sequences of all ENSMMUG00000001758 retrocopies