Parental gene:

ARF3, ENSG00000134287

Aliases:None
Description:ADP-ribosylation factor 3 [Source:HGNC Symbol;Acc:654]
Organism:Human (Homo sapiens)
Coordinates:12:49297285..49351334(-)


>ENSG00000134287
ATGGGCAATATCTTTGGAAACCTTCTCAAGAGCCTGATTGGGAAGAAGGAGATGCGCATCCTGATGGTGGGCCTGGATGC
CGCAGGAAAGACCACCATCCTATACAAGCTGAAACTCGGGGAGATCGTCACCACCATCCCTACCATTGGGTTCAATGTGG
AGACAGTGGAGTATAAGAACATCAGCTTTACAGTGTGGGATGTGGGTGGCCAGGACAAGATTCGACCCCTCTGGAGACAC
TACTTCCAGAACACCCAAGGGTTGATATTTGTGGTCGACAGCAATGATCGGGAGCGAGTAAATGAGGCCCGGGAAGAGCT
GATGAGAATGCTGGCGGAGGACGAGCTCCGGGATGCTGTACTCCTTGTCTTTGCAAACAAACAGGATCTGCCTAATGCTA
TGAACGCTGCTGAGATCACAGACAAGCTGGGCCTGCATTCCCTTCGTCACCGTAACTGGTACATTCAGGCCACCTGTGCC
ACCAGCGGGGACGGGCTGTACGAAGGCCTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 222 .28 RPM
bodymap2_adrenal 202 .28 RPM
bodymap2_brain 477 .85 RPM
bodymap2_breast 155 .62 RPM
bodymap2_colon 182 .88 RPM
bodymap2_heart 43 .75 RPM
bodymap2_kidney 192 .83 RPM
bodymap2_liver 55 .17 RPM
bodymap2_lung 215 .07 RPM
bodymap2_lymph_node 138 .22 RPM
bodymap2_ovary 206 .47 RPM
bodymap2_prostate 152 .09 RPM
bodymap2_skeletal_muscle 17 .62 RPM
bodymap2_testis 221 .73 RPM
bodymap2_thyroid 265 .03 RPM
bodymap2_white_blood_cells 309 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008240 ortholog_one2one 1 retrogene
retro_acar_12,
Cavia porcellus ENSCPOG00000025074 ortholog_one2one 1 retrogene
retro_cpor_92,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Homo sapiens ENSG00000134108 other_paralog 1 retrogene
retro_hsap_361,
Homo sapiens ENSG00000143761 within_species_paralog 3 retrogenes
retro_hsap_1008, retro_hsap_1160, retro_hsap_3763,
Homo sapiens ENSG00000168374 within_species_paralog 2 retrogenes
retro_hsap_1296, retro_hsap_4221,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Loxodonta africana ENSLAFG00000004207 ortholog_one2one 1 retrogene
retro_lafr_115,
Macropus eugenii ENSMEUG00000005072 possible_ortholog 7 retrogenes
retro_meug_1036, retro_meug_1117, retro_meug_1857, retro_meug_29, retro_meug_395, retro_meug_616, retro_meug_946,
Microcebus murinus ENSMICG00000017545 ortholog_one2one 1 retrogene
retro_mmur_37,
Monodelphis domestica ENSMODG00000013804 ortholog_one2one 1 retrogene
retro_mdom_241,
Mus musculus ENSMUSG00000051853 ortholog_one2one 1 retrogene
retro_mmus_147,
Nomascus leucogenys ENSNLEG00000017859 ortholog_one2one 2 retrogenes
retro_nleu_1348, retro_nleu_94,
Petromyzon marinus ENSPMAG00000000531 possible_ortholog 1 retrogene
retro_pmar_5,
Rattus norvegicus ENSRNOG00000033155 ortholog_one2one 1 retrogene
retro_rnor_272,
Rattus norvegicus ENSRNOG00000048089 possible_ortholog 1 retrogene
retro_rnor_2521,
Sarcophilus harrisii ENSSHAG00000003635 ortholog_one2one 2 retrogenes
retro_shar_25, retro_shar_364,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,
Tursiops truncatus ENSTTRG00000004698 ortholog_one2one 1 retrogene
retro_ttru_1081,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_36 69.54 96.13
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Download FASTA sequences of all ENSG00000134287 retrocopies