Parental gene:

BOD1, ENSG00000145919

Aliases:BOD1, FAM44B
Description:biorientation of chromosomes in cell division 1 [Source:HGNC Symbol;Acc:25114]
Organism:Human (Homo sapiens)
Coordinates:5:173034516..173043663(-)


>ENSG00000145919
ATGGCGGACGGCGGCGGCGGCGGGGGAACTGGCGCGGTGGGCGGCGGCGGAACTAGCCAGGCCTCTGCCGGGGCAGCGAC
TGGCGCTACTGGGGCCAGCGGGGGCGGTGGCCCCATCAACCCGGCCTCGCTGCCTCCCGGCGACCCGCAGCTCATCGCTC
TCATCGTGGAGCAGCTCAAGAGCCGGGGCCTTTTTGACAGCTTCCGCCGGGACTGCCTGGCCGACGTGGACACCAAGCCA
GCTTACCAAAACCTGAGGCAGAAAGTGGATAATTTTGTGTCAACACATCTGGACAAGCAGGAATGGAATCCTACGATGAA
CAAAAACCAGTTGCGAAATGGTCTGAGGCAGAGTGTGGTTCAGTCAGGGATGTTGGAAGCTGGAGTAGACAGGATTATTT
CTCAGGTGGTGGATCCAAAACTTAACCACATCTTCAGGCCACAAATAGAACGAGCAATTCATGAGTTCCTGGCGGCCCAG
AAAAAAGCAGCTGTGCCAGCACCCCCTCCAGAGCCCGAAGGCCAGGACCCTCCAGCTCCATCTCAGGACACTTCCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 35 .18 RPM
bodymap2_adrenal 25 .55 RPM
bodymap2_brain 22 .13 RPM
bodymap2_breast 32 .35 RPM
bodymap2_colon 37 .14 RPM
bodymap2_heart 26 .03 RPM
bodymap2_kidney 27 .92 RPM
bodymap2_liver 9 .70 RPM
bodymap2_lung 27 .97 RPM
bodymap2_lymph_node 29 .04 RPM
bodymap2_ovary 45 .47 RPM
bodymap2_prostate 46 .52 RPM
bodymap2_skeletal_muscle 41 .18 RPM
bodymap2_testis 51 .39 RPM
bodymap2_thyroid 61 .33 RPM
bodymap2_white_blood_cells 15 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034598 ortholog_one2many 1 retrogene
retro_btau_663,
Canis familiaris ENSCAFG00000016776 ortholog_one2many 1 retrogene
retro_cfam_1374,
Callithrix jacchus ENSCJAG00000031971 ortholog_one2many 4 retrogenes
retro_cjac_1154, retro_cjac_1515, retro_cjac_1536, retro_cjac_953,
Gorilla gorilla ENSGGOG00000010925 ortholog_one2one 2 retrogenes
retro_ggor_1365, retro_ggor_794,
Microcebus murinus ENSMICG00000002626 ortholog_one2many 1 retrogene
retro_mmur_1126,
Macaca mulatta ENSMMUG00000013793 ortholog_one2one 2 retrogenes
retro_mmul_803, retro_mmul_869,
Mus musculus ENSMUSG00000044502 ortholog_one2many 1 retrogene
retro_mmus_3661,
Nomascus leucogenys ENSNLEG00000000476 ortholog_one2one 1 retrogene
retro_nleu_1224,
Oryctolagus cuniculus ENSOCUG00000014283 ortholog_many2many 1 retrogene
retro_ocun_1071,
Otolemur garnettii ENSOGAG00000001107 ortholog_one2many 3 retrogenes
retro_ogar_1477, retro_ogar_2663, retro_ogar_3112,
Pongo abelii ENSPPYG00000016057 ortholog_one2one 2 retrogenes
retro_pabe_1567, retro_pabe_1587,
Pan troglodytes ENSPTRG00000017544 ortholog_one2one 2 retrogenes
retro_ptro_1282, retro_ptro_757,
Ictidomys tridecemlineatus ENSSTOG00000013505 ortholog_one2many 1 retrogene
retro_itri_1164,
Tupaia belangeri ENSTBEG00000014046 ortholog_one2many 1 retrogene
retro_tbel_3451,
Tarsius syrichta ENSTSYG00000007617 ortholog_one2many 1 retrogene
retro_tsyr_818,
Tursiops truncatus ENSTTRG00000000384 ortholog_one2many 2 retrogenes
retro_ttru_1004, retro_ttru_457,
Vicugna pacos ENSVPAG00000004260 ortholog_one2many 1 retrogene
retro_vpac_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_102 83.33 94.05
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2. retro_hsap_993 72.03 63.24
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3. retro_hsap_1867 67.79 80.00
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Download FASTA sequences of all ENSG00000145919 retrocopies