Parental gene: | SRSF10, ENSGGOG00000000392 |
| Aliases: | None |
| Description: | serine/arginine-rich splicing factor 10 [Source:HGNC Symbol;Acc:16713] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 1:24781881..24792001(-) |
>ENSGGOG00000000392
ATGTCCCGCTACCTGCGTCCCCCCAACACGTCTCTGTTCGTCAGGAATGTGGCCGACGACACCAGGTCTGAAGACTTGCG
GCGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTTCTACACTCGCCGTCCAAGAGGATTTG
CTTATGTTCAATACACATTTGAGGATGTTCGTGATGCTGAAGACGCTTTACATAATTTGGACAGAAAGTGGATTTGTGGA
CGGCAGATTGAAATACAGTTTGCCCAGGGGGATCGAAAGACACCAAATCAGATGAAAGCCAAGGAAGGGAGGAATGTGTA
CAGTTCTTCACGCTATGATGATTATGACAGATACAGACGTTCTAGAAGCCGAAGCTATGAAAGGAGGAGATCAAGAAGTC
GGTCTTTTGATTACAACTATAGAAGATCGTATAGTCCTAGAAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGC
CATTCCGACAATGATAGATTCAAACACCGAAATCGATCTTTTTCAAGATCTAAATCCAATTCAAGATCACGGTCCAAGTC
CCAGCCCAAGAAAGAAATGAAGGCTAAATCACGTTCTAGGTCTGCATCTCACACC
ATGTCCCGCTACCTGCGTCCCCCCAACACGTCTCTGTTCGTCAGGAATGTGGCCGACGACACCAGGTCTGAAGACTTGCG
GCGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTTCTACACTCGCCGTCCAAGAGGATTTG
CTTATGTTCAATACACATTTGAGGATGTTCGTGATGCTGAAGACGCTTTACATAATTTGGACAGAAAGTGGATTTGTGGA
CGGCAGATTGAAATACAGTTTGCCCAGGGGGATCGAAAGACACCAAATCAGATGAAAGCCAAGGAAGGGAGGAATGTGTA
CAGTTCTTCACGCTATGATGATTATGACAGATACAGACGTTCTAGAAGCCGAAGCTATGAAAGGAGGAGATCAAGAAGTC
GGTCTTTTGATTACAACTATAGAAGATCGTATAGTCCTAGAAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGC
CATTCCGACAATGATAGATTCAAACACCGAAATCGATCTTTTTCAAGATCTAAATCCAATTCAAGATCACGGTCCAAGTC
CCAGCCCAAGAAAGAAATGAAGGCTAAATCACGTTCTAGGTCTGCATCTCACACC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 12 .08 RPM |
| SRP007412_cerebellum | 14 .70 RPM |
| SRP007412_heart | 4 .19 RPM |
| SRP007412_kidney | 14 .23 RPM |
| SRP007412_liver | 10 .02 RPM |
| SRP007412_testis | 58 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009869 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008072 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004836 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020883 | ortholog_one2one | 9 retrogenes | |
| Cavia porcellus | ENSCPOG00000024533 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008699 | possible_ortholog | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000014286 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000188529 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014378 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000028520 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015845 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013180 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000029326 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015374 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001726 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007992 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000956 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016150 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1044 | 80.40 | 96.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1411 | 71.98 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1522 | 71.60 | 80.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2870 | 80.17 | 59.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000000392 retrocopies