Parental gene: | RBBP4, ENSGGOG00000011313 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 1:33742249..33767673(+) |
>ENSGGOG00000011313
ATGGCCGACAAGGAAGCAGCCTTCGACGACGCAGTGGAAGAACGAGTGATCAACGAGGAATACAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTCACTGCCCAGTGGCTTCCAGATGTAA
CCAGTTACAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACATCGGATGAACAAAACCAT
CTTGTTATAGCCAGTGTGCAGCTCCCTAATGATGATGCTCAGTTTGATGCGTCACACTACGACAGTGAGAAAGGAGAATT
TGGAGGTTTTGGTTCAGTTAGTGGAAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGGGCCCGTT
ATATGCCCCAGAACCCTTGTATCATCGCAACAAAGACTCCTTCCAGTGATGTTCTTGTCTTGGACTATACAAAACATCCT
AAACCAGATCTTTCTGGAGACTGCAACTCAGACTTGCATCTCCATGGACATCAGAAAAAAGGCTATGGGCTTTCTTGGCC
AAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGATCACACCATCTACCCGTGGGACATCAGTGCTGTTCCAAAGGAGG
GAAATGTGGTGGATGCAAAGACCATCTTTACAGGGCATACAGTAGTAGTAGAAGATGTTTCCTGGCATCTGTTCCATGAG
TCTCTGTTTGGGTCAGTTGCTGATCATCAGAAACTTAGGATTTGGGATACTTGTTCAAACAATACTTCCAAACCAAGCCA
CTCAGTTGAAGCTCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAGTTCATTCTTGCCACAGGATCAG
CTGACAAGACTGTTGCCTTGTGGGATCTGAGAAATCTGAAACCCATGAATTTTAACTGTAACGTGTATAATACCTTGACT
TCCTCTTCCGTTCAGTGGTCACCTCACAATGAGACTATTTTAGCTTCCAGTGGTACTGATCGCAGACTGAATGTCTGGGA
TTTAAGTAAAATTGGAGAGGAACAATCCCCGGAAGATGCAGAAGACGGGCCACCAGAGTTGTTGTTTATTCATGGTGGTC
ATACTGCCAAGATATCTGATTTCTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATCATG
CAAGTGTGGCAAATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGCGTGGATCCAGAAGGACAAGGGTCCTA
G
ATGGCCGACAAGGAAGCAGCCTTCGACGACGCAGTGGAAGAACGAGTGATCAACGAGGAATACAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTCACTGCCCAGTGGCTTCCAGATGTAA
CCAGTTACAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACATCGGATGAACAAAACCAT
CTTGTTATAGCCAGTGTGCAGCTCCCTAATGATGATGCTCAGTTTGATGCGTCACACTACGACAGTGAGAAAGGAGAATT
TGGAGGTTTTGGTTCAGTTAGTGGAAAAATTGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTAAACAGGGCCCGTT
ATATGCCCCAGAACCCTTGTATCATCGCAACAAAGACTCCTTCCAGTGATGTTCTTGTCTTGGACTATACAAAACATCCT
AAACCAGATCTTTCTGGAGACTGCAACTCAGACTTGCATCTCCATGGACATCAGAAAAAAGGCTATGGGCTTTCTTGGCC
AAATCTCAGTGGGCACTTACTTAGTGCTTCAGATGATCACACCATCTACCCGTGGGACATCAGTGCTGTTCCAAAGGAGG
GAAATGTGGTGGATGCAAAGACCATCTTTACAGGGCATACAGTAGTAGTAGAAGATGTTTCCTGGCATCTGTTCCATGAG
TCTCTGTTTGGGTCAGTTGCTGATCATCAGAAACTTAGGATTTGGGATACTTGTTCAAACAATACTTCCAAACCAAGCCA
CTCAGTTGAAGCTCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAGTTCATTCTTGCCACAGGATCAG
CTGACAAGACTGTTGCCTTGTGGGATCTGAGAAATCTGAAACCCATGAATTTTAACTGTAACGTGTATAATACCTTGACT
TCCTCTTCCGTTCAGTGGTCACCTCACAATGAGACTATTTTAGCTTCCAGTGGTACTGATCGCAGACTGAATGTCTGGGA
TTTAAGTAAAATTGGAGAGGAACAATCCCCGGAAGATGCAGAAGACGGGCCACCAGAGTTGTTGTTTATTCATGGTGGTC
ATACTGCCAAGATATCTGATTTCTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATCATG
CAAGTGTGGCAAATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGCGTGGATCCAGAAGGACAAGGGTCCTA
G
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 33 .86 RPM |
| SRP007412_cerebellum | 32 .70 RPM |
| SRP007412_heart | 7 .54 RPM |
| SRP007412_kidney | 47 .84 RPM |
| SRP007412_liver | 30 .97 RPM |
| SRP007412_testis | 172 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001021 | possible_ortholog | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000015352 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013437 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009940 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015214 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011632 | ortholog_one2one | 2 retrogenes | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021492 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010923 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002236 | ortholog_one2one | 3 retrogenes | |
| Vicugna pacos | ENSVPAG00000011876 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1022 | 82.73 | 50.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1314 | 88.03 | 72.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1867 | 69.20 | 56.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2428 | 84.17 | 64.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000011313 retrocopies