Parental gene: | RBBP4, ENSTBEG00000002236 |
| Aliases: | None |
| Description: | retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_3699:40042..51822(+) |
>ENSTBEG00000002236
CCTGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACCTCGGATGAGCAAAACCACCTGGTGATAGC
CAGCGTGCAGCTCCCTAACGATGATGCTCAGTTTGATGCGTCACACTACGACAGCGAGAAAGGAGAATTTGGAGGTTTTG
GCTCAGTTAGTGGGAAAATCGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTGAACAGGGCTCGTTATATGCCCCAG
AACCCTTGTATCATTGCAACAAAGACTCCATCGAGCGACGTGCTTGTTTTCGACTATACAAAGCATCCTTCTAAGCCAGA
CCCTTCTGGAGAGTGCAACCCGGACTTGCGTCTCCGTGGACACCAGAAGGAAGGCTATGGGCTTTCTTGGAACCCGAATC
TCAGTGGGCACTTACTTAGTGCTTCCGATGACCACACCATCTGCCTGTGGGACATCAGTGCCGTTCCGAAGGAAGGCAAA
GTGGTGGATGCAAAGACCATCTTTACGGGGCACACGGCGGTGGTGGAAGATGTCTCCTGGCATCTGCTCCATGAGTCTCT
CTTTGGATCAGTTGCTGATGATCAGAAACTTATGATATGGGATACGCGTTCAAACAATACTTCCAAACCTAGCCACTCAG
CTGATGCCCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAATTCATCCATGCCACAGGGTCGGCTGAC
AAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTCAGTGGTCACCTCACAATGAGACTATTTTGGCTTCCAGCGGTACTGACCGCAGACTAAATGTCTGGGATTTAAGTA
AAATTGGAGAGGAACAGTCGCCAGAAGATGCGGAGGATGGGCCACCAGAGTTGTTGTTTATTCATGGCGGTCACACTGCC
AAGATATCCGATTTCTCGTGGAATCCCAACGAACCTTGGGTGATTTGCTCTGTATCAGAAGACAATATCATGCAGGTGTG
GCAGATG
CCTGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGGACACACACCTCGGATGAGCAAAACCACCTGGTGATAGC
CAGCGTGCAGCTCCCTAACGATGATGCTCAGTTTGATGCGTCACACTACGACAGCGAGAAAGGAGAATTTGGAGGTTTTG
GCTCAGTTAGTGGGAAAATCGAAATAGAAATCAAGATCAACCATGAAGGAGAAGTGAACAGGGCTCGTTATATGCCCCAG
AACCCTTGTATCATTGCAACAAAGACTCCATCGAGCGACGTGCTTGTTTTCGACTATACAAAGCATCCTTCTAAGCCAGA
CCCTTCTGGAGAGTGCAACCCGGACTTGCGTCTCCGTGGACACCAGAAGGAAGGCTATGGGCTTTCTTGGAACCCGAATC
TCAGTGGGCACTTACTTAGTGCTTCCGATGACCACACCATCTGCCTGTGGGACATCAGTGCCGTTCCGAAGGAAGGCAAA
GTGGTGGATGCAAAGACCATCTTTACGGGGCACACGGCGGTGGTGGAAGATGTCTCCTGGCATCTGCTCCATGAGTCTCT
CTTTGGATCAGTTGCTGATGATCAGAAACTTATGATATGGGATACGCGTTCAAACAATACTTCCAAACCTAGCCACTCAG
CTGATGCCCACACTGCTGAAGTGAACTGCCTCTCTTTCAATCCTTATAGTGAATTCATCCATGCCACAGGGTCGGCTGAC
AAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTCAGTGGTCACCTCACAATGAGACTATTTTGGCTTCCAGCGGTACTGACCGCAGACTAAATGTCTGGGATTTAAGTA
AAATTGGAGAGGAACAGTCGCCAGAAGATGCGGAGGATGGGCCACCAGAGTTGTTGTTTATTCATGGCGGTCACACTGCC
AAGATATCCGATTTCTCGTGGAATCCCAACGAACCTTGGGTGATTTGCTCTGTATCAGAAGACAATATCATGCAGGTGTG
GCAGATG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001021 | possible_ortholog | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000015352 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011313 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000009940 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015214 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011632 | ortholog_one2one | 2 retrogenes | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021492 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010923 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010151 | within_species_paralog | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000011876 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1360 | 84.02 | 69.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_1718 | 90.05 | 60.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_3802 | 78.28 | 69.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000002236 retrocopies