Parental gene: | KPNA2, ENSGGOG00000027535 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 5:15497662..15510186(-) |
>ENSGGOG00000027535
ATGTCCACCAACGAGAATGCTAATACACCAGCTGCCCGTCTTCACAGATTCAAGAACAAGGGAAAAGACAGTACAGAAAT
GAGGCGTCGCAGAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGCTGAAGAGGAGAAATGTAA
GCTCATTTCCTGATGATGCTACTTCTCCGCTGCAGGAAAACCGCAACAACCAGGGCACTGTAAATTGGTCGGTTGATGAC
ATTGTCAAAGGCATAAATAGCAGCAATGTGGAAAATCAGCTCCAAGCTACTCAAGCTGCCAGGAAACTACTTTCCAGAGA
AAAACAGCCCCCCATAGACAACATAATCCGGGCTGGTTTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTGTA
GTCCCATTCAGTTTGAATCTGCTTGGGCACTCACTAACATTGCTTCTGGGACATCAGAACAAACCAAGGCTGTGGTAGAT
GGAGGTGCCATCCCAGCATTCATTTCTCTGTTGGCATCTCCCCATGCTCACATCAGTGAACAAGCTGTCTGGGCTCTAGG
AAACATTGCAGGTGATGGCTCGGTGTTCCGAGACTTGGTTATTAAGTACGGTGCAGTTGACCCACTGTTGGCTCTCCTTG
CAGTTCCTGATATGTCATCTTTAGCATGTGGCTACTTACGTAATCTTACCTGGACACTTTCTAATCTTTGCCGCAACAAG
AATCCTGCACCCCCGATAGATGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGCATCATGATGATCCAGAAGT
ATTAGCAGATACCTGCTGGGCTATTTCCTACCTTACTGATGGTCCAAATGAACGAATTGGCATGGTCGTGAAAACAGGAG
TTGTGCCCCAACTTGTGAAGCTTCTAGGAGCTTCTGAATTGCCAATTGTGACTCCTGCCCTAAGAGCCATAGGGAATATC
GTCACTGGTACAGATGAACAGACTCAGGTTTTGATTGATGCAGGAGCACTCGCCGTCTTTCCCAGCCTGCTCACCAACCC
CAAAACTAACATTCAGAAGGAAGCTACGTGGACAATGTCAAACATCACAGCCAGCCAGGACCAGATACAGCAAGTTGTGA
ATCACGGATTAGTCCCATTCCTTGTCAGCGTTCTCTCTAAGGCAGATTTTAAGACACAAAAGGAAGCTGTGTGGGCGGTG
ACCAACTATACCAGTGGCGGAACAGTTGAACAGATTGTGTACCTTGTTCACTGTGGCATAATAGAACCGTTGGTGAACCT
CTTAACTGCAAAAGATACCAAGATAATTCTGGTTATCCTGGATGCCATTTCAAATATCTTTCAGGCTGCTGAGAAACTAG
GTGAAACTGAGAAACTTAGTATAATGATTGAAGAATGTGGAGGCTTAGACAAAATTGAAGCTCTACAAAACCATGAAAAT
GAGTCTGTGTATAAGGCTTCGTTAAGCTTAATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAAAACGTTGTGCC
AGAAACTACCTCTGAAGGCTACACCTTCCAAGTTCAGGATGGGGTTCCTGGGACATTTAACTTTTAG
ATGTCCACCAACGAGAATGCTAATACACCAGCTGCCCGTCTTCACAGATTCAAGAACAAGGGAAAAGACAGTACAGAAAT
GAGGCGTCGCAGAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGCTGAAGAGGAGAAATGTAA
GCTCATTTCCTGATGATGCTACTTCTCCGCTGCAGGAAAACCGCAACAACCAGGGCACTGTAAATTGGTCGGTTGATGAC
ATTGTCAAAGGCATAAATAGCAGCAATGTGGAAAATCAGCTCCAAGCTACTCAAGCTGCCAGGAAACTACTTTCCAGAGA
AAAACAGCCCCCCATAGACAACATAATCCGGGCTGGTTTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTGTA
GTCCCATTCAGTTTGAATCTGCTTGGGCACTCACTAACATTGCTTCTGGGACATCAGAACAAACCAAGGCTGTGGTAGAT
GGAGGTGCCATCCCAGCATTCATTTCTCTGTTGGCATCTCCCCATGCTCACATCAGTGAACAAGCTGTCTGGGCTCTAGG
AAACATTGCAGGTGATGGCTCGGTGTTCCGAGACTTGGTTATTAAGTACGGTGCAGTTGACCCACTGTTGGCTCTCCTTG
CAGTTCCTGATATGTCATCTTTAGCATGTGGCTACTTACGTAATCTTACCTGGACACTTTCTAATCTTTGCCGCAACAAG
AATCCTGCACCCCCGATAGATGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGCATCATGATGATCCAGAAGT
ATTAGCAGATACCTGCTGGGCTATTTCCTACCTTACTGATGGTCCAAATGAACGAATTGGCATGGTCGTGAAAACAGGAG
TTGTGCCCCAACTTGTGAAGCTTCTAGGAGCTTCTGAATTGCCAATTGTGACTCCTGCCCTAAGAGCCATAGGGAATATC
GTCACTGGTACAGATGAACAGACTCAGGTTTTGATTGATGCAGGAGCACTCGCCGTCTTTCCCAGCCTGCTCACCAACCC
CAAAACTAACATTCAGAAGGAAGCTACGTGGACAATGTCAAACATCACAGCCAGCCAGGACCAGATACAGCAAGTTGTGA
ATCACGGATTAGTCCCATTCCTTGTCAGCGTTCTCTCTAAGGCAGATTTTAAGACACAAAAGGAAGCTGTGTGGGCGGTG
ACCAACTATACCAGTGGCGGAACAGTTGAACAGATTGTGTACCTTGTTCACTGTGGCATAATAGAACCGTTGGTGAACCT
CTTAACTGCAAAAGATACCAAGATAATTCTGGTTATCCTGGATGCCATTTCAAATATCTTTCAGGCTGCTGAGAAACTAG
GTGAAACTGAGAAACTTAGTATAATGATTGAAGAATGTGGAGGCTTAGACAAAATTGAAGCTCTACAAAACCATGAAAAT
GAGTCTGTGTATAAGGCTTCGTTAAGCTTAATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAAAACGTTGTGCC
AGAAACTACCTCTGAAGGCTACACCTTCCAAGTTCAGGATGGGGTTCCTGGGACATTTAACTTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 22 .06 RPM |
| SRP007412_cerebellum | 7 .49 RPM |
| SRP007412_heart | 2 .66 RPM |
| SRP007412_kidney | 13 .82 RPM |
| SRP007412_liver | 4 .54 RPM |
| SRP007412_testis | 215 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000018411 | possible_ortholog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000011598 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000026318 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000019151 | possible_ortholog | 6 retrogenes | |
| Echinops telfairi | ENSETEG00000004445 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000001936 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000182481 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000027946 | ortholog_one2many | 7 retrogenes | |
| Macaca mulatta | ENSMMUG00000018256 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003897 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000018362 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001749 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000027672 | possible_ortholog | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000008569 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000004976 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000015329 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011391 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000001855 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_2044 | 85.12 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2609 | 81.82 | 57.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000027535 retrocopies