Parental gene:

ENSDNOG00000019151

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_37344:3..3344(+)


>ENSDNOG00000019151
TTTGTGTCCTTCTTGGACAGAACTGATTGTACTCCCATTCAGTTTGAATCTGCTTGGGCACTCACTAACATTGCTTCTGG
GACATCAGAACAGACCAAGGCTGTGGTAGACGGAGGTGGTATCCCAGCATTCGTTTCTTTGTTGGCATCTCCCCATGCTC
ACATCAGTGAACAAGCTGTCTGGGCTCTAGGAAACATTGCAGGTGATGGCTCAGCTTTCCGAGACTTGGTTATCAAATAT
GGTGCAATTGATCCTCTGTTGGCTCTGCTTGCACCTCCTAACATGTCATCTTTAGCATATAGTTACTTACGTAATCTTAC
CTGGACACTTTCAAACCTTTGTCGAAACAAGAATCCTGCACCCCCTTTAGATGCTGTTGAGCAGATTCTTCCTACTCTCA
TTCGTCTCCTGCATCATGATGATCCAGAAGTATTAACAGATACCTGCTGGGCCATTTCCTATCTTACTGATGGTCCAAAT
GAACGGATTGAAATGGTTGTGAAAACTGGAGTTGTGCCTCAGCTTGTGAAGCTCCTTGGGGCTACTCAATTGCCAATTGT
GACTCCTGCACTAAGAGCCATAGGGAATATTGTTACTGGGACAGATGAACAGACTCAGGTTGTAATAGATGCAGGAGCAC
TTGCTGTCTTTCCCAGCCTGCTAACTAACTCCAAAAATAATATTCAGAAGGAAGCTACCTGGACAATGTCAAACATCACA
GCTGGCCGTCAGGACCAGATACAGCAAGTAGTGAATCATGGATTGGTCCCTTTCCTTGTTAGCGTTCTTTCTCAGGCAGA
GTTTAAGACACAAAAGGAAGCTGTATGGGCTGTGACCAACTATACAAGTGGTGGAACAGTTGAACAGATTGTATACCTTG
TCCATTGTGGAATAATAGAACCATTGATGAACCTTTTAACTGCAAAGGATACCAAAATTATACTGGTTATTCTCGATGCC
ATTTCAAATATCTTTCAGGCTGCTGAGAAACTAGGTGAAACTGAGAAACTTAGTATAATGATTGAAGAATGTGGAGGCTT
GGACAAAATTGAAGCTCTACAAAACCATGAAAATGAGTCTGTTTACAAGGCTTCATTAAGCTTGATTGAGAAGTATTTCT
CTGTAGAGGAAGAAGAAGATCAGAATGTTGTGCCAGAAACTACCTCTGAAGGCTATACCTTCCAAGTTCAGGATGGTACT
CCTGGGACTTTTAACTTTTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 30 .34 RPM
SRP012922_cerebellum 8 .94 RPM
SRP012922_heart 8 .82 RPM
SRP012922_kidney 6 .30 RPM
SRP012922_liver 4 .02 RPM
SRP012922_lung 9 .77 RPM
SRP012922_quadricep_muscle 14 .71 RPM
SRP012922_spleen 33 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018411 possible_ortholog 3 retrogenes
retro_amel_1161, retro_amel_1318, retro_amel_440,
Bos taurus ENSBTAG00000012225 possible_ortholog 1 retrogene
retro_btau_1830,
Canis familiaris ENSCAFG00000011598 possible_ortholog 2 retrogenes
retro_cfam_648, retro_cfam_90,
Cavia porcellus ENSCPOG00000026318 possible_ortholog 1 retrogene
retro_cpor_46,
Equus caballus ENSECAG00000020573 possible_ortholog 2 retrogenes
retro_ecab_1017, retro_ecab_1123,
Echinops telfairi ENSETEG00000004445 ortholog_one2many 2 retrogenes
retro_etel_346, retro_etel_347,
Felis catus ENSFCAG00000001936 ortholog_one2many 2 retrogenes
retro_fcat_1176, retro_fcat_921,
Homo sapiens ENSG00000182481 possible_ortholog 1 retrogene
retro_hsap_2950,
Gorilla gorilla ENSGGOG00000027535 possible_ortholog 2 retrogenes
retro_ggor_2044, retro_ggor_2609,
Myotis lucifugus ENSMLUG00000027946 possible_ortholog 7 retrogenes
retro_mluc_1034, retro_mluc_1258, retro_mluc_1414, retro_mluc_288, retro_mluc_50, retro_mluc_52, retro_mluc_993,
Macaca mulatta ENSMMUG00000018256 possible_ortholog 3 retrogenes
retro_mmul_1140, retro_mmul_1635, retro_mmul_1947,
Monodelphis domestica ENSMODG00000003897 ortholog_many2many 1 retrogene
retro_mdom_271,
Mus musculus ENSMUSG00000018362 possible_ortholog 1 retrogene
retro_mmus_229,
Nomascus leucogenys ENSNLEG00000001749 possible_ortholog 3 retrogenes
retro_nleu_1052, retro_nleu_1634, retro_nleu_208,
Oryctolagus cuniculus ENSOCUG00000015913 possible_ortholog 4 retrogenes
retro_ocun_1765, retro_ocun_1916, retro_ocun_426, retro_ocun_690,
Otolemur garnettii ENSOGAG00000027672 possible_ortholog 7 retrogenes
retro_ogar_1044, retro_ogar_1142, retro_ogar_1757, retro_ogar_2008, retro_ogar_464, retro_ogar_477, retro_ogar_936,
Pongo abelii ENSPPYG00000008569 possible_ortholog 1 retrogene
retro_pabe_3501,
Pteropus vampyrus ENSPVAG00000004976 possible_ortholog 2 retrogenes
retro_pvam_1321, retro_pvam_1333,
Rattus norvegicus ENSRNOG00000015329 possible_ortholog 1 retrogene
retro_rnor_42,
Sarcophilus harrisii ENSSHAG00000011391 ortholog_one2many 1 retrogene
retro_shar_165,
Tupaia belangeri ENSTBEG00000006274 ortholog_one2one 14 retrogenes
retro_tbel_1635, retro_tbel_2077, retro_tbel_2672, retro_tbel_2792, retro_tbel_290, retro_tbel_3638, retro_tbel_4120, retro_tbel_4358, retro_tbel_4414, retro_tbel_4435, retro_tbel_4558, retro_tbel_810, retro_tbel_97, retro_tbel_976,
Vicugna pacos ENSVPAG00000001855 possible_ortholog 3 retrogenes
retro_vpac_124, retro_vpac_162, retro_vpac_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_379 66.89 71.18
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2. retro_dnov_693 76.28 100.00
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3. retro_dnov_1184 78.62 99.75
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4. retro_dnov_1811 98.53 100.00
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5. retro_dnov_2161 71.08 61.08
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6. retro_dnov_2279 85.65 58.13
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Download FASTA sequences of all ENSDNOG00000019151 retrocopies