Parental gene:

KPNA2, ENSCAFG00000011598

Aliases:None
Description:Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:E2R6L9]
Organism:Dog (Canis familiaris)
Coordinates:9:12547165..12554684(-)


>ENSCAFG00000011598
ATGTCCACCAACGAGAATGCTAATTCACCAGCTGCCCGCCTTAACAGATTCAAGAACAAGGGGAAAGACAGTACGGAAAT
GAGGCGGCGCCGAATAGAAGTTAATGTGGAGCTGAGGAAAGCGAAGAAGGATGACCAGATGCTGAAAAGGAGAAATGTAA
GCTCATTTCCTGATGACGCTACCTCTCCACTGCAGGAAAACCGCAACAACCAGGGCACTGTAAATTGGTCTGTTGATGAC
ATTGTCAAAGGCATAAATAGCAACAATTTGGAAAGCCAGCTCCAGGCTACTCAAGCTGCTAGGAAACTGCTTTCTAGGGA
AAAACAGCCCCCCATAGACAACATAATCCGGGCTGGTTTGATTCCAAAATTTGTGTCCTTCTTGGGCAGAACTGATTGTA
GTCCTATTCAGTTTGAATCTGCTTGGGCCCTCACTAACATTGCTTCTGGGACATCAGAACAGACCAAGGCTGTGGTCGAT
GGAGGTGCTATCCCAGCATTCATTTCTCTGTTGGCATCTTCCCATGCCCACATCAGTGAACAAGCTGTATGGGCTCTAGG
AAACATTGCAGGTGATGGTTCAGTTTTTCGAGACTTGGTTATCAAGTATGGTGCAGTTGACCCACTGTTGGCTCTCCTTG
CAGTTCCTGATATGTCATCTTTAGCATGTGGTTACTTACGTAACCTTACTTGGACACTCTCAAACCTTTGTCGCAACAAG
AATCCAGCACCCCCGTTAGATGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGTCTCCTGCATCATGATGATCCAGAAGT
ATTAGCAGATACCTGCTGGGCCATTTCCTACCTTACTGATGGTCCAAATGAACGGATTGAAATGGTTGTGAAAACAGGAG
TTGTGCCCCAACTTGTGAAGCTTTTAGGAGCTACTGAATTACCCATTGTGACTCCTGCACTAAGAGCCATAGGAAATATT
GTCACTGGGACAGATGAACAGACTCAGGTTGTAATAGATGCAGGAGCACTTGCTGTCTTTCCTAGCCTGCTAACGAACCC
CAAAACTAATATTCAGAAGGAAGCTACATGGACGATGTCAAACATCACAGCTGGTCGCCAGGACCAGATACAGCAAGTTG
TGAATCATGGATTAGTCCCATTCCTCGTTGGTGTTCTCTCTAAGGCAGACTTTAAGACACAAAAGGAAGCTGTATGGGCT
GTGACCAACTATACAAGTGGTGGAACAGTTGAACAGATTGTATACCTCGTTCATTGTGGCATAATAGAACCATTGATGAA
CCTCTTAACTGCAAAAGATACCAAAATTATTCTGGTTATTCTAGATGCCATTTCAAACATCTTTCAGGCTGCTGAGAAAC
TAGGTGAAACTGAGAAACTTAGTATAATGATTGAAGAATGTGGGGGTTTGGACAAAATTGAAGCTCTACAAAACCATGAA
AACGAGTCTGTGTACAAAGCTTCATTAAACTTGATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAGAATGTTGT
GCCCGAAACTACCTCTGAAGGCTATACATTCCAAGTTCAGGATGGCACTCCTGGGACCTTTAACTTTTAG

Library Parental gene expression (RPM)
SRP017611_brain 8 .97 RPM
SRP017611_kidney 14 .20 RPM
SRP017611_liver 3 .55 RPM
SRP012049_cerebellum 25 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018411 ortholog_one2many 3 retrogenes
retro_amel_1161, retro_amel_1318, retro_amel_440,
Bos taurus ENSBTAG00000012225 ortholog_one2many 1 retrogene
retro_btau_1830,
Canis familiaris ENSCAFG00000015125 within_species_paralog 2 retrogenes
retro_cfam_459, retro_cfam_861,
Cavia porcellus ENSCPOG00000026318 possible_ortholog 1 retrogene
retro_cpor_46,
Dasypus novemcinctus ENSDNOG00000019151 possible_ortholog 6 retrogenes
retro_dnov_1184, retro_dnov_1811, retro_dnov_2161, retro_dnov_2279, retro_dnov_379, retro_dnov_693,
Equus caballus ENSECAG00000020573 ortholog_one2many 2 retrogenes
retro_ecab_1017, retro_ecab_1123,
Echinops telfairi ENSETEG00000004445 ortholog_one2many 2 retrogenes
retro_etel_346, retro_etel_347,
Felis catus ENSFCAG00000001936 ortholog_one2many 2 retrogenes
retro_fcat_1176, retro_fcat_921,
Homo sapiens ENSG00000182481 possible_ortholog 1 retrogene
retro_hsap_2950,
Gorilla gorilla ENSGGOG00000027535 possible_ortholog 2 retrogenes
retro_ggor_2044, retro_ggor_2609,
Myotis lucifugus ENSMLUG00000027946 possible_ortholog 7 retrogenes
retro_mluc_1034, retro_mluc_1258, retro_mluc_1414, retro_mluc_288, retro_mluc_50, retro_mluc_52, retro_mluc_993,
Macaca mulatta ENSMMUG00000018256 possible_ortholog 3 retrogenes
retro_mmul_1140, retro_mmul_1635, retro_mmul_1947,
Monodelphis domestica ENSMODG00000003897 ortholog_many2many 1 retrogene
retro_mdom_271,
Mus musculus ENSMUSG00000018362 possible_ortholog 1 retrogene
retro_mmus_229,
Nomascus leucogenys ENSNLEG00000001749 possible_ortholog 3 retrogenes
retro_nleu_1052, retro_nleu_1634, retro_nleu_208,
Oryctolagus cuniculus ENSOCUG00000015913 ortholog_one2many 4 retrogenes
retro_ocun_1765, retro_ocun_1916, retro_ocun_426, retro_ocun_690,
Otolemur garnettii ENSOGAG00000027672 possible_ortholog 7 retrogenes
retro_ogar_1044, retro_ogar_1142, retro_ogar_1757, retro_ogar_2008, retro_ogar_464, retro_ogar_477, retro_ogar_936,
Pongo abelii ENSPPYG00000008569 ortholog_many2many 1 retrogene
retro_pabe_3501,
Pteropus vampyrus ENSPVAG00000004976 possible_ortholog 2 retrogenes
retro_pvam_1321, retro_pvam_1333,
Rattus norvegicus ENSRNOG00000015329 possible_ortholog 1 retrogene
retro_rnor_42,
Sarcophilus harrisii ENSSHAG00000011391 ortholog_one2many 1 retrogene
retro_shar_165,
Tupaia belangeri ENSTBEG00000006274 possible_ortholog 14 retrogenes
retro_tbel_1635, retro_tbel_2077, retro_tbel_2672, retro_tbel_2792, retro_tbel_290, retro_tbel_3638, retro_tbel_4120, retro_tbel_4358, retro_tbel_4414, retro_tbel_4435, retro_tbel_4558, retro_tbel_810, retro_tbel_97, retro_tbel_976,
Vicugna pacos ENSVPAG00000001855 possible_ortholog 3 retrogenes
retro_vpac_124, retro_vpac_162, retro_vpac_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_90 99.05 100.00
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2. retro_cfam_648 69.74 64.08
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Download FASTA sequences of all ENSCAFG00000011598 retrocopies