RetrogeneDB - Parental gene ENSMICG00000016633 details

							
>ENSMICG00000016633
ATGAACGCTGCGGCCAGCAGCTACCCCATGGCCTCCCTGTACGTGGGTGACCTGCACTCGGACGTCACCGAGGCCATGCT

GTATGAAAAGTTCAGCCCTGCGGGGCCTGTGCTGTCCATCCGGGTCTGTCGAGATATGATCACTCGCCGCTCCCTGGGTT

ATGCCTACGTCAACTTCCAGCAGCCAGCTGACGCTGAGCGGGCCTTGGACACCATGAACTTTGATGTGATTAAAGGAAAG

CCAATCCGTATCATGTGGTCTCAGAGGGATCCCTCTTTGAGAAAGTCTGGTGTGGGAAACGTCTTCATCAAGAACCTGGA

CAAATCTATAGATAACAAGGCACTTTATGATACTTTTTCTGCTTTTGGAAACATTCTGTCCTGTAAGGTGGTGTGTGATG

AGAACGGCTCTAAGGGTTATGCTTTTGTCCACTTCGAAACCCAAGAGGCTGCCGACAAGGCCATCGAGAAGATGAATGGC

ATGCTCCTCAATGACCGCAAAGTGTTTGTGGGCAGATTCAAGTCTCGCAAAGAGCGGGAAGCTGAGCTTGGAGCCAAAGC

CAAGGAATTTACCAATGTGTATATCAAGAACTTTGGGGAAGAGGTGGATGATGAGAGTCTGAAAGAGCTATTCAGCCAGT

TTGGTAAGACACTAAGTGTCAAGGTGATGAGAGATCCCAGTGGGAAATCCAAAGGCTTTGGCGCTGTGGAAGAGATGAAT

GGAAAAGAAATCAGTGGTAAAGTCATATTTGTAGGCCGTGCTCAGAAGAAAGTGGAACGGCAGGCAGAGTTAAAACGGAA

ATTTGAGCAGCTGAAACAGGAGAGAATTAGTCGATATCAGGGGGTGAATCTCTACATTAAGAACTTGGATGACACTATTG

ATGATGAGAAATTAAGGAAAGAGTTTTCTCCTTTTGGATCAATCACCAGTGCTAAGGTGATGCTGGAAGATGGAAGAAGC

AAAGGGTTTGGCTTCGTCTGCTTCTCATCTCCTGAAGAGGCAACCAAAGCAGTCACTGAGATGAATGGACGCATCGTGGG

CTCCAAGCCACTGTATGTTGCCCTGGCCCAGAGGAAGGAAGAGAGAAAGGCTCACCTGACCAACCAATATATGCAGCGGG

TGGCTGGAATGAGAGCACTCCCTGCCAATGCCATCTTAAATCAGTTCCAGCCTGCAGCTGGTGGCTACTTTGTGCCAGCA

GTCCCACAGGCTCAAGGAAGACCTCCGTATTATACACCTAACCAGTTAGCACAGATGAGGCCTAATCCACGCTGGCAGCA

AGGCGGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCTATACGCCAGTCTGGGCCTCGTCCAACTCTTCGCCATCTGG

CTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTCCCTACTACTACTCAGAGAGTCGGGTCTGAGTGCCCGGACCGCTTG

GCTATGGACTTTGGTGGGGCTGGTGCCGCCCAGCAAGGGCTGACTGACAGCTGCAAGTCTGGAGGCGTTCCCACAGCCGT

GCAGAACTTAGCGCCTCGTGCTGCTGTCACTGCTGCTGCTGCTGCTCCTAGAGCTGTTGCACCATACAAATACGCCTCCA

GTGTCCGCAGCCCTCATCCTGCAATACAGCCTCTGCAGGCACCCCAGCCTGCAGTCCATGTGCAGGGGCAGGAGCCTCTG

ACTGCCTCCATGCTGGCCGCAGCACCCCCCCAAGAACAGAAGCAGATGTTGGGAGAACGTTTGTTCCCACTCATCCAAAC

AATGCATTCAAACCTGGCTGGAAAGATTACGGGAATGCTGCTGGAGATCGATAACTCTGAACTGCTGCACATGCTGGAGT

CCCCTGAGTCTCTCCGCTCCAAGGTGGATGAAGCTGTGGCAGTTCTACAGGCTCATCATGCCAAGAAAGAAGCTGCCCAG

AAAGTGGGTGCTGTTGCTGCTGCTACCTCTTAG

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000011535	possible_ortholog	2 retrogenes	retro_amel_107, retro_amel_676,
Bos taurus	ENSBTAG00000017125	possible_ortholog	3 retrogenes	retro_btau_1492, retro_btau_28, retro_btau_656,
Canis familiaris	ENSCAFG00000003081	possible_ortholog	2 retrogenes	retro_cfam_45, retro_cfam_837,
Choloepus hoffmanni	ENSCHOG00000005327	possible_ortholog	3 retrogenes	retro_chof_1150, retro_chof_1182, retro_chof_1274,
Callithrix jacchus	ENSCJAG00000002512	ortholog_one2many	3 retrogenes	retro_cjac_214, retro_cjac_2722, retro_cjac_284,
Cavia porcellus	ENSCPOG00000009552	ortholog_one2many	2 retrogenes	retro_cpor_1330, retro_cpor_77,
Equus caballus	ENSECAG00000009396	possible_ortholog	2 retrogenes	retro_ecab_2, retro_ecab_502,
Felis catus	ENSFCAG00000015254	possible_ortholog	2 retrogenes	retro_fcat_116, retro_fcat_545,
Homo sapiens	ENSG00000090621	ortholog_one2many	2 retrogenes	retro_hsap_109, retro_hsap_74,
Gorilla gorilla	ENSGGOG00000004002	ortholog_one2many	3 retrogenes	retro_ggor_2127, retro_ggor_87, retro_ggor_916,
Loxodonta africana	ENSLAFG00000000151	possible_ortholog	3 retrogenes	retro_lafr_1144, retro_lafr_390, retro_lafr_597,
Microcebus murinus	ENSMICG00000000974	within_species_paralog	1 retrogene	retro_mmur_42,
Myotis lucifugus	ENSMLUG00000012068	possible_ortholog	2 retrogenes	retro_mluc_228, retro_mluc_397,
Macaca mulatta	ENSMMUG00000007497	ortholog_one2many	1 retrogene	retro_mmul_178,
Monodelphis domestica	ENSMODG00000017657	ortholog_many2many	2 retrogenes	retro_mdom_1090, retro_mdom_1805,
Mustela putorius furo	ENSMPUG00000014414	possible_ortholog	2 retrogenes	retro_mputfur_152, retro_mputfur_546,
Mus musculus	ENSMUSG00000011257	ortholog_many2many	7 retrogenes	retro_mmus_2006, retro_mmus_2326, retro_mmus_2327, retro_mmus_798, retro_mmus_801, retro_mmus_803, retro_mmus_805,
Nomascus leucogenys	ENSNLEG00000011928	ortholog_one2many	2 retrogenes	retro_nleu_1517, retro_nleu_62,
Oryctolagus cuniculus	ENSOCUG00000000562	ortholog_one2many	2 retrogenes	retro_ocun_153, retro_ocun_792,
Otolemur garnettii	ENSOGAG00000004067	ortholog_one2many	1 retrogene	retro_ogar_71,
Ochotona princeps	ENSOPRG00000011984	ortholog_one2many	1 retrogene	retro_opri_1133,
Pongo abelii	ENSPPYG00000001506	ortholog_one2many	2 retrogenes	retro_pabe_190, retro_pabe_2563,
Pan troglodytes	ENSPTRG00000000573	ortholog_one2many	3 retrogenes	retro_ptro_101, retro_ptro_2093, retro_ptro_8,
Rattus norvegicus	ENSRNOG00000015642	ortholog_many2many	2 retrogenes	retro_rnor_175, retro_rnor_92,
Sarcophilus harrisii	ENSSHAG00000018139	ortholog_one2many	1 retrogene	retro_shar_823,
Sus scrofa	ENSSSCG00000003660	possible_ortholog	3 retrogenes	retro_sscr_1210, retro_sscr_974, retro_sscr_975,
Tursiops truncatus	ENSTTRG00000014340	possible_ortholog	2 retrogenes	retro_ttru_1117, retro_ttru_246,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_mmur_675	96.85	53.69	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSMICG00000016633 retrocopies

Parental gene:	ENSMICG00000016633
Aliases:	None
Description:	None
Organism:	*Mouse Lemur (Microcebus murinus)*
Coordinates:	GeneScaffold_3691:528773..543335(-)

Parental gene:

ENSMICG00000016633